Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 POM34YLR018C 900 nt11.84□□□□□ -0.51
BRE1Q07457 BMT6YLR063W 1098 nt11.84□□□□□ -0.51
BRE1Q07457 TOM6YOR045W 186 nt11.84□□□□□ -0.51
BRE1Q07457 LSC2YGR244C 1284 nt11.83□□□□□ -0.52
BRE1Q07457 NDI1YML120C 1542 nt11.82□□□□□ -0.52
BRE1Q07457 PLB1YMR008C 1995 nt11.8□□□□□ -0.52
BRE1Q07457 ATG15YCR068W 1563 nt11.77□□□□□ -0.53
BRE1Q07457 YML089CYML089C 369 nt11.77□□□□□ -0.53
BRE1Q07457 PEX2YJL210W 816 nt11.76□□□□□ -0.53
BRE1Q07457 RDN37-1RDN37-1 5354 nt11.76□□□□□ -0.53
BRE1Q07457 RDN37-2RDN37-2 5354 nt11.76□□□□□ -0.53
BRE1Q07457 RPL4BYDR012W 1089 nt11.74□□□□□ -0.53
BRE1Q07457 AAC1YMR056C 930 nt11.74□□□□□ -0.53
BRE1Q07457 RPL4AYBR031W 1089 nt11.74□□□□□ -0.53
BRE1Q07457 GAP1YKR039W 1809 nt11.74□□□□□ -0.53
BRE1Q07457 GLR1YPL091W 1452 nt11.71□□□□□ -0.53
BRE1Q07457 CLB6YGR109C 1143 nt11.71□□□□□ -0.53
BRE1Q07457 HIP1YGR191W 1812 nt11.71□□□□□ -0.54
BRE1Q07457 UME6YDR207C 2511 nt11.7□□□□□ -0.54
BRE1Q07457 IRC24YIR036C 792 nt11.7□□□□□ -0.54
BRE1Q07457 UTH1YKR042W 1098 nt11.68□□□□□ -0.54
BRE1Q07457 TIF6YPR016C 738 nt11.68□□□□□ -0.54
BRE1Q07457 YMR244WYMR244W 1068 nt11.67□□□□□ -0.54
BRE1Q07457 RPS14BYJL191W 417 nt11.66□□□□□ -0.54
BRE1Q07457 SNF1YDR477W 1902 nt11.65□□□□□ -0.54
BRE1Q07457 NRT1YOR071C 1797 nt11.64□□□□□ -0.55
BRE1Q07457 UTR1YJR049C 1593 nt11.63□□□□□ -0.55
BRE1Q07457 MET28YIR017C 564 nt11.63□□□□□ -0.55
BRE1Q07457 PRM5YIL117C 957 nt11.57□□□□□ -0.56
BRE1Q07457 SDH5YOL071W 489 nt11.57□□□□□ -0.56
BRE1Q07457 DIF1YLR437C 402 nt11.56□□□□□ -0.56
BRE1Q07457 ALG12YNR030W 1656 nt11.52□□□□□ -0.56
BRE1Q07457 SAM35YHR083W 990 nt11.51□□□□□ -0.57
BRE1Q07457 TSC10YBR265W 963 nt11.51□□□□□ -0.57
BRE1Q07457 BIO5YNR056C 1686 nt11.51□□□□□ -0.57
BRE1Q07457 YLR111WYLR111W 333 nt11.49□□□□□ -0.57
BRE1Q07457 FIT3YOR383C 615 nt11.49□□□□□ -0.57
BRE1Q07457 YAR028WYAR028W 705 nt11.48□□□□□ -0.57
BRE1Q07457 YGR012WYGR012W 1182 nt11.47□□□□□ -0.57
BRE1Q07457 YMR226CYMR226C 804 nt11.47□□□□□ -0.57
BRE1Q07457 RBG2YGR173W 1107 nt11.46□□□□□ -0.57
BRE1Q07457 ALD4YOR374W 1560 nt11.45□□□□□ -0.58
BRE1Q07457 YLR279WYLR279W 390 nt11.44□□□□□ -0.58
BRE1Q07457 RAD23YEL037C 1197 nt11.43□□□□□ -0.58
BRE1Q07457 MTG2YHR168W 1557 nt11.42□□□□□ -0.58
BRE1Q07457 AKR2YOR034C 2250 nt11.41□□□□□ -0.58
BRE1Q07457 SSN3YPL042C 1668 nt11.41□□□□□ -0.58
BRE1Q07457 ZTA1YBR046C 1005 nt11.41□□□□□ -0.58
BRE1Q07457 ALP1YNL270C 1722 nt11.4□□□□□ -0.58
BRE1Q07457 HIF1YLL022C 1158 nt11.4□□□□□ -0.58
BRE1Q07457 MSB4YOL112W 1479 nt11.38□□□□□ -0.59
BRE1Q07457 BSP1YPR171W 1731 nt11.37□□□□□ -0.59
BRE1Q07457 YER190C-AYER190C-A 576 nt11.35□□□□□ -0.59
BRE1Q07457 YGR296C-AYGR296C-A 576 nt11.35□□□□□ -0.59
BRE1Q07457 YML133W-AYML133W-A 576 nt11.35□□□□□ -0.59
BRE1Q07457 YNL339W-AYNL339W-A 576 nt11.35□□□□□ -0.59
BRE1Q07457 YPL283W-AYPL283W-A 576 nt11.35□□□□□ -0.59
BRE1Q07457 SED1YDR077W 1017 nt11.34□□□□□ -0.59
BRE1Q07457 CAB5YDR196C 726 nt11.34□□□□□ -0.59
BRE1Q07457 RIB3YDR487C 627 nt11.32□□□□□ -0.6
BRE1Q07457 LIP1YMR298W 453 nt11.31□□□□□ -0.6
BRE1Q07457 HXT1YHR094C 1713 nt11.31□□□□□ -0.6
BRE1Q07457 DBP1YPL119C 1854 nt11.3□□□□□ -0.6
BRE1Q07457 YLR437C-AYLR437C-A 228 nt11.3□□□□□ -0.6
BRE1Q07457 YPL222C-AYPL222C-A 246 nt11.3□□□□□ -0.6
BRE1Q07457 NAR1YNL240C 1476 nt11.25□□□□□ -0.61
BRE1Q07457 PBP1YGR178C 2169 nt11.25□□□□□ -0.61
BRE1Q07457 YBL086CYBL086C 1401 nt11.25□□□□□ -0.61
BRE1Q07457 CYT2YKL087C 675 nt11.2□□□□□ -0.62
BRE1Q07457 SAM1YLR180W 1149 nt11.2□□□□□ -0.62
BRE1Q07457 YPL251WYPL251W 303 nt11.2□□□□□ -0.62
BRE1Q07457 BRR1YPR057W 1026 nt11.18□□□□□ -0.62
BRE1Q07457 SHY1YGR112W 1170 nt11.17□□□□□ -0.62
BRE1Q07457 TOA2YKL058W 369 nt11.17□□□□□ -0.62
BRE1Q07457 GND1YHR183W 1470 nt11.17□□□□□ -0.62
BRE1Q07457 LEU9YOR108W 1815 nt11.16□□□□□ -0.62
BRE1Q07457 UGA4YDL210W 1716 nt11.16□□□□□ -0.62
BRE1Q07457 FCY21YER060W 1587 nt11.16□□□□□ -0.62
BRE1Q07457 ZRT3YKL175W 1512 nt11.15□□□□□ -0.62
BRE1Q07457 LOT5YKL183W 921 nt11.15□□□□□ -0.62
BRE1Q07457 MEP3YPR138C 1470 nt11.13□□□□□ -0.63
BRE1Q07457 YMR103CYMR103C 363 nt11.13□□□□□ -0.63
BRE1Q07457 SMM1YNR015W 1155 nt11.13□□□□□ -0.63
BRE1Q07457 MCH5YOR306C 1566 nt11.12□□□□□ -0.63
BRE1Q07457 APT2YDR441C 546 nt11.1□□□□□ -0.63
BRE1Q07457 GND2YGR256W 1479 nt11.09□□□□□ -0.63
BRE1Q07457 PRY1YJL079C 900 nt11.07□□□□□ -0.64
BRE1Q07457 UFO1YML088W 2007 nt11.07□□□□□ -0.64
BRE1Q07457 YPI1YFR003C 468 nt11.06□□□□□ -0.64
BRE1Q07457 TRT2tT(CGU)K 72 nt11.05□□□□□ -0.64
BRE1Q07457 URA6YKL024C 615 nt11.05□□□□□ -0.64
BRE1Q07457 YJL067WYJL067W 351 nt11.03□□□□□ -0.64
BRE1Q07457 LSB3YFR024C-A 1380 nt11.02□□□□□ -0.65
BRE1Q07457 OYE3YPL171C 1203 nt11.01□□□□□ -0.65
BRE1Q07457 ADH1YOL086C 1047 nt11□□□□□ -0.65
BRE1Q07457 YAT1YAR035W 2064 nt10.98□□□□□ -0.65
BRE1Q07457 SAM2YDR502C 1155 nt10.98□□□□□ -0.65
BRE1Q07457 YNR029CYNR029C 1290 nt10.98□□□□□ -0.65
BRE1Q07457 PET8YNL003C 855 nt10.97□□□□□ -0.65
BRE1Q07457 CSM1YCR086W 573 nt10.96□□□□□ -0.65
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms