Protein–RNA interactions for Protein: P53829

CAF40, Protein CAF40, yeastyeast

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF40P53829 ALG3YBL082C 1377 nt8.49□□□□□ -1.05
CAF40P53829 FRE6YLL051C 2139 nt8.49□□□□□ -1.05
CAF40P53829 PLB1YMR008C 1995 nt8.48□□□□□ -1.05
CAF40P53829 CYT1YOR065W 930 nt8.47□□□□□ -1.05
CAF40P53829 ILV2YMR108W 2064 nt8.46□□□□□ -1.05
CAF40P53829 ESBP6YNL125C 2022 nt8.45□□□□□ -1.06
CAF40P53829 YKL030WYKL030W 606 nt8.44□□□□□ -1.06
CAF40P53829 DMA2YNL116W 1569 nt8.42□□□□□ -1.06
CAF40P53829 ARO8YGL202W 1503 nt8.41□□□□□ -1.06
CAF40P53829 TAD3YLR316C 969 nt8.39□□□□□ -1.07
CAF40P53829 RSC8YFR037C 1674 nt8.39□□□□□ -1.07
CAF40P53829 SGA1YIL099W 1650 nt8.39□□□□□ -1.07
CAF40P53829 MEP3YPR138C 1470 nt8.38□□□□□ -1.07
CAF40P53829 YIL100C-AYIL100C-A 339 nt8.38□□□□□ -1.07
CAF40P53829 SPP1YPL138C 1062 nt8.38□□□□□ -1.07
CAF40P53829 KES1YPL145C 1305 nt8.36□□□□□ -1.07
CAF40P53829 OPI10YOL032W 741 nt8.36□□□□□ -1.07
CAF40P53829 GAL2YLR081W 1725 nt8.36□□□□□ -1.07
CAF40P53829 YHR218WYHR218W 1812 nt8.35□□□□□ -1.07
CAF40P53829 ARP6YLR085C 1317 nt8.34□□□□□ -1.07
CAF40P53829 MTO1YGL236C 2010 nt8.34□□□□□ -1.07
CAF40P53829 ZAP1YJL056C 2643 nt8.33□□□□□ -1.08
CAF40P53829 TIM17YJL143W 477 nt8.33□□□□□ -1.08
CAF40P53829 YOR072WYOR072W 315 nt8.33□□□□□ -1.08
CAF40P53829 YLR415CYLR415C 339 nt8.32□□□□□ -1.08
CAF40P53829 RFC1YOR217W 2586 nt8.31□□□□□ -1.08
CAF40P53829 SHM2YLR058C 1410 nt8.31□□□□□ -1.08
CAF40P53829 PCP1YGR101W 1041 nt8.31□□□□□ -1.08
CAF40P53829 UTR1YJR049C 1593 nt8.31□□□□□ -1.08
CAF40P53829 BET2YPR176C 978 nt8.3□□□□□ -1.08
CAF40P53829 DAT1YML113W 747 nt8.29□□□□□ -1.08
CAF40P53829 TOK1YJL093C 2076 nt8.29□□□□□ -1.08
CAF40P53829 YCR102CYCR102C 1107 nt8.28□□□□□ -1.08
CAF40P53829 DTR1YBR180W 1719 nt8.28□□□□□ -1.08
CAF40P53829 MDL2YPL270W 2322 nt8.28□□□□□ -1.08
CAF40P53829 CCT2YIL142W 1584 nt8.27□□□□□ -1.09
CAF40P53829 SAM35YHR083W 990 nt8.26□□□□□ -1.09
CAF40P53829 BDH1YAL060W 1149 nt8.26□□□□□ -1.09
CAF40P53829 LSB6YJL100W 1824 nt8.24□□□□□ -1.09
CAF40P53829 MEX67YPL169C 1800 nt8.24□□□□□ -1.09
CAF40P53829 NRT1YOR071C 1797 nt8.23□□□□□ -1.09
CAF40P53829 NBP35YGL091C 987 nt8.23□□□□□ -1.09
CAF40P53829 ODC1YPL134C 933 nt8.23□□□□□ -1.09
CAF40P53829 tL(GAG)GtL(GAG)G 82 nt8.18□□□□□ -1.1
CAF40P53829 NIT1YIL164C 600 nt8.18□□□□□ -1.1
CAF40P53829 BSP1YPR171W 1731 nt8.15□□□□□ -1.1
CAF40P53829 SHY1YGR112W 1170 nt8.15□□□□□ -1.1
CAF40P53829 SGT2YOR007C 1041 nt8.15□□□□□ -1.1
CAF40P53829 DBP1YPL119C 1854 nt8.15□□□□□ -1.11
CAF40P53829 HXT10YFL011W 1641 nt8.14□□□□□ -1.11
CAF40P53829 CWC15YDR163W 528 nt8.14□□□□□ -1.11
CAF40P53829 LSC2YGR244C 1284 nt8.14□□□□□ -1.11
CAF40P53829 UBX6YJL048C 1191 nt8.14□□□□□ -1.11
CAF40P53829 YSP3YOR003W 1437 nt8.13□□□□□ -1.11
CAF40P53829 SSL2YIL143C 2532 nt8.13□□□□□ -1.11
CAF40P53829 HXT1YHR094C 1713 nt8.12□□□□□ -1.11
CAF40P53829 GAP1YKR039W 1809 nt8.12□□□□□ -1.11
CAF40P53829 TIR3YIL011W 810 nt8.1□□□□□ -1.11
CAF40P53829 MRP20YDR405W 792 nt8.09□□□□□ -1.11
CAF40P53829 NBA1YOL070C 1506 nt8.08□□□□□ -1.12
CAF40P53829 RBG1YAL036C 1110 nt8.08□□□□□ -1.12
CAF40P53829 MDM35YKL053C-A 261 nt8.08□□□□□ -1.12
CAF40P53829 DAK2YFL053W 1776 nt8.07□□□□□ -1.12
CAF40P53829 QDR2YIL121W 1629 nt8.07□□□□□ -1.12
CAF40P53829 UFD1YGR048W 1086 nt8.07□□□□□ -1.12
CAF40P53829 RTG1YOL067C 534 nt8.07□□□□□ -1.12
CAF40P53829 TPN1YGL186C 1740 nt8.06□□□□□ -1.12
CAF40P53829 GID8YMR135C 1368 nt8.05□□□□□ -1.12
CAF40P53829 LPD1YFL018C 1500 nt8.04□□□□□ -1.12
CAF40P53829 MRS6YOR370C 1812 nt8.03□□□□□ -1.12
CAF40P53829 ALR1YOL130W 2580 nt8.03□□□□□ -1.12
CAF40P53829 PHO23YNL097C 993 nt8.03□□□□□ -1.12
CAF40P53829 ZTA1YBR046C 1005 nt8.03□□□□□ -1.12
CAF40P53829 LSB5YCL034W 1065 nt8.03□□□□□ -1.12
CAF40P53829 FIT1YDR534C 1587 nt8.02□□□□□ -1.13
CAF40P53829 YNL115CYNL115C 1935 nt8.02□□□□□ -1.13
CAF40P53829 PRO1YDR300C 1287 nt8.02□□□□□ -1.13
CAF40P53829 URA6YKL024C 615 nt8.01□□□□□ -1.13
CAF40P53829 VPS75YNL246W 795 nt8.01□□□□□ -1.13
CAF40P53829 ATG15YCR068W 1563 nt8.01□□□□□ -1.13
CAF40P53829 HUA1YGR268C 597 nt8□□□□□ -1.13
CAF40P53829 SBA1YKL117W 651 nt8□□□□□ -1.13
CAF40P53829 SHB17YKR043C 816 nt8□□□□□ -1.13
CAF40P53829 YML089CYML089C 369 nt8□□□□□ -1.13
CAF40P53829 YKL133CYKL133C 1392 nt7.99□□□□□ -1.13
CAF40P53829 AGP3YFL055W 1677 nt7.99□□□□□ -1.13
CAF40P53829 PEX25YPL112C 1185 nt7.98□□□□□ -1.13
CAF40P53829 TOM71YHR117W 1920 nt7.97□□□□□ -1.13
CAF40P53829 MIM1YOL026C 342 nt7.97□□□□□ -1.13
CAF40P53829 POM34YLR018C 900 nt7.96□□□□□ -1.14
CAF40P53829 ACH1YBL015W 1581 nt7.96□□□□□ -1.14
CAF40P53829 DIG1YPL049C 1359 nt7.96□□□□□ -1.14
CAF40P53829 tD(GUC)BtD(GUC)B 72 nt7.95□□□□□ -1.14
CAF40P53829 tD(GUC)DtD(GUC)D 72 nt7.95□□□□□ -1.14
CAF40P53829 tD(GUC)G1tD(GUC)G1 72 nt7.95□□□□□ -1.14
CAF40P53829 tD(GUC)G2tD(GUC)G2 72 nt7.95□□□□□ -1.14
CAF40P53829 tD(GUC)I1tD(GUC)I1 72 nt7.95□□□□□ -1.14
CAF40P53829 tD(GUC)I2tD(GUC)I2 72 nt7.95□□□□□ -1.14
CAF40P53829 tD(GUC)J1tD(GUC)J1 72 nt7.95□□□□□ -1.14
CAF40P53829 tD(GUC)J2tD(GUC)J2 72 nt7.95□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 30.3 ms