Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 XYL2YLR070C 1071 nt12.62□□□□□ -0.39
VPS27P40343 TOM6YOR045W 186 nt12.62□□□□□ -0.39
VPS27P40343 ATG15YCR068W 1563 nt12.6□□□□□ -0.39
VPS27P40343 YGL034CYGL034C 366 nt12.58□□□□□ -0.4
VPS27P40343 PRM5YIL117C 957 nt12.58□□□□□ -0.4
VPS27P40343 UTR1YJR049C 1593 nt12.58□□□□□ -0.4
VPS27P40343 COQ2YNR041C 1119 nt12.57□□□□□ -0.4
VPS27P40343 UME6YDR207C 2511 nt12.56□□□□□ -0.4
VPS27P40343 NAR1YNL240C 1476 nt12.56□□□□□ -0.4
VPS27P40343 MRP20YDR405W 792 nt12.55□□□□□ -0.4
VPS27P40343 PEX2YJL210W 816 nt12.54□□□□□ -0.4
VPS27P40343 YML089CYML089C 369 nt12.54□□□□□ -0.4
VPS27P40343 MCH5YOR306C 1566 nt12.54□□□□□ -0.4
VPS27P40343 YCR087WYCR087W 516 nt12.52□□□□□ -0.41
VPS27P40343 PBP1YGR178C 2169 nt12.48□□□□□ -0.41
VPS27P40343 AIM45YPR004C 1035 nt12.46□□□□□ -0.41
VPS27P40343 HIF1YLL022C 1158 nt12.45□□□□□ -0.42
VPS27P40343 HIP1YGR191W 1812 nt12.45□□□□□ -0.42
VPS27P40343 ALD4YOR374W 1560 nt12.44□□□□□ -0.42
VPS27P40343 RBG1YAL036C 1110 nt12.44□□□□□ -0.42
VPS27P40343 TIF6YPR016C 738 nt12.44□□□□□ -0.42
VPS27P40343 SAM35YHR083W 990 nt12.41□□□□□ -0.42
VPS27P40343 CYT2YKL087C 675 nt12.41□□□□□ -0.42
VPS27P40343 DIF1YLR437C 402 nt12.4□□□□□ -0.42
VPS27P40343 RPL4BYDR012W 1089 nt12.38□□□□□ -0.43
VPS27P40343 RPL4AYBR031W 1089 nt12.38□□□□□ -0.43
VPS27P40343 CLB6YGR109C 1143 nt12.36□□□□□ -0.43
VPS27P40343 MET28YIR017C 564 nt12.36□□□□□ -0.43
VPS27P40343 NRT1YOR071C 1797 nt12.35□□□□□ -0.43
VPS27P40343 UTH1YKR042W 1098 nt12.35□□□□□ -0.43
VPS27P40343 NDI1YML120C 1542 nt12.35□□□□□ -0.43
VPS27P40343 RPS14BYJL191W 417 nt12.32□□□□□ -0.44
VPS27P40343 YAR028WYAR028W 705 nt12.27□□□□□ -0.45
VPS27P40343 YER190C-AYER190C-A 576 nt12.24□□□□□ -0.45
VPS27P40343 YGR296C-AYGR296C-A 576 nt12.24□□□□□ -0.45
VPS27P40343 YML133W-AYML133W-A 576 nt12.24□□□□□ -0.45
VPS27P40343 YNL339W-AYNL339W-A 576 nt12.24□□□□□ -0.45
VPS27P40343 YPL283W-AYPL283W-A 576 nt12.24□□□□□ -0.45
VPS27P40343 ZTA1YBR046C 1005 nt12.22□□□□□ -0.45
VPS27P40343 DBP1YPL119C 1854 nt12.22□□□□□ -0.45
VPS27P40343 HXT1YHR094C 1713 nt12.22□□□□□ -0.45
VPS27P40343 MTG2YHR168W 1557 nt12.22□□□□□ -0.45
VPS27P40343 YAT1YAR035W 2064 nt12.21□□□□□ -0.45
VPS27P40343 AKR2YOR034C 2250 nt12.2□□□□□ -0.46
VPS27P40343 SBA1YKL117W 651 nt12.18□□□□□ -0.46
VPS27P40343 LIP1YMR298W 453 nt12.18□□□□□ -0.46
VPS27P40343 SDH5YOL071W 489 nt12.18□□□□□ -0.46
VPS27P40343 FIT3YOR383C 615 nt12.18□□□□□ -0.46
VPS27P40343 SED1YDR077W 1017 nt12.16□□□□□ -0.46
VPS27P40343 ALP1YNL270C 1722 nt12.16□□□□□ -0.46
VPS27P40343 RPM1RPM1 483 nt12.15□□□□□ -0.46
VPS27P40343 ZRT3YKL175W 1512 nt12.14□□□□□ -0.47
VPS27P40343 YBL086CYBL086C 1401 nt12.13□□□□□ -0.47
VPS27P40343 TSC10YBR265W 963 nt12.13□□□□□ -0.47
VPS27P40343 RDN37-1RDN37-1 5354 nt12.12□□□□□ -0.47
VPS27P40343 RDN37-2RDN37-2 5354 nt12.12□□□□□ -0.47
VPS27P40343 GLR1YPL091W 1452 nt12.12□□□□□ -0.47
VPS27P40343 SHY1YGR112W 1170 nt12.1□□□□□ -0.47
VPS27P40343 YGR012WYGR012W 1182 nt12.09□□□□□ -0.47
VPS27P40343 YLR279WYLR279W 390 nt12.09□□□□□ -0.47
VPS27P40343 SAM1YLR180W 1149 nt12.06□□□□□ -0.48
VPS27P40343 MSB4YOL112W 1479 nt12.05□□□□□ -0.48
VPS27P40343 YJL067WYJL067W 351 nt12.04□□□□□ -0.48
VPS27P40343 TOA2YKL058W 369 nt12.04□□□□□ -0.48
VPS27P40343 YPL251WYPL251W 303 nt12.04□□□□□ -0.48
VPS27P40343 BRR1YPR057W 1026 nt12.03□□□□□ -0.48
VPS27P40343 INA1YLR413W 2028 nt12.02□□□□□ -0.49
VPS27P40343 YMR244WYMR244W 1068 nt12.01□□□□□ -0.49
VPS27P40343 LEU9YOR108W 1815 nt12□□□□□ -0.49
VPS27P40343 YLR111WYLR111W 333 nt12□□□□□ -0.49
VPS27P40343 CMP2YML057W 1815 nt11.98□□□□□ -0.49
VPS27P40343 GND2YGR256W 1479 nt11.98□□□□□ -0.49
VPS27P40343 RPC82YPR190C 1965 nt11.98□□□□□ -0.49
VPS27P40343 YMR103CYMR103C 363 nt11.97□□□□□ -0.49
VPS27P40343 MEP3YPR138C 1470 nt11.96□□□□□ -0.49
VPS27P40343 RAD23YEL037C 1197 nt11.96□□□□□ -0.49
VPS27P40343 UFO1YML088W 2007 nt11.95□□□□□ -0.5
VPS27P40343 CAB5YDR196C 726 nt11.94□□□□□ -0.5
VPS27P40343 URA6YKL024C 615 nt11.94□□□□□ -0.5
VPS27P40343 UGA4YDL210W 1716 nt11.94□□□□□ -0.5
VPS27P40343 YPL222C-AYPL222C-A 246 nt11.92□□□□□ -0.5
VPS27P40343 TRT2tT(CGU)K 72 nt11.9□□□□□ -0.5
VPS27P40343 OYE3YPL171C 1203 nt11.9□□□□□ -0.5
VPS27P40343 SPT20YOL148C 1815 nt11.9□□□□□ -0.5
VPS27P40343 YMR226CYMR226C 804 nt11.87□□□□□ -0.51
VPS27P40343 RDN25-1RDN25-1 3396 nt11.85□□□□□ -0.51
VPS27P40343 RDN25-2RDN25-2 3396 nt11.85□□□□□ -0.51
VPS27P40343 RIB3YDR487C 627 nt11.85□□□□□ -0.51
VPS27P40343 PET8YNL003C 855 nt11.85□□□□□ -0.51
VPS27P40343 SAM2YDR502C 1155 nt11.84□□□□□ -0.51
VPS27P40343 FCY21YER060W 1587 nt11.84□□□□□ -0.51
VPS27P40343 CWC15YDR163W 528 nt11.83□□□□□ -0.52
VPS27P40343 YLR437C-AYLR437C-A 228 nt11.82□□□□□ -0.52
VPS27P40343 RBG2YGR173W 1107 nt11.81□□□□□ -0.52
VPS27P40343 SSN3YPL042C 1668 nt11.79□□□□□ -0.52
VPS27P40343 SMM1YNR015W 1155 nt11.79□□□□□ -0.52
VPS27P40343 APT2YDR441C 546 nt11.77□□□□□ -0.53
VPS27P40343 GND1YHR183W 1470 nt11.76□□□□□ -0.53
VPS27P40343 LOT5YKL183W 921 nt11.75□□□□□ -0.53
VPS27P40343 BNI5YNL166C 1347 nt11.75□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 59.5 ms