Protein–RNA interactions for Protein: P20448

HCA4, ATP-dependent RNA helicase HCA4, yeastyeast

Known RBP Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCA4P20448 AIM45YPR004C 1035 nt11.37□□□□□ -0.59
HCA4P20448 PRO1YDR300C 1287 nt11.36□□□□□ -0.59
HCA4P20448 TOM6YOR045W 186 nt11.35□□□□□ -0.59
HCA4P20448 MRP20YDR405W 792 nt11.32□□□□□ -0.6
HCA4P20448 SNF1YDR477W 1902 nt11.32□□□□□ -0.6
HCA4P20448 RBG1YAL036C 1110 nt11.31□□□□□ -0.6
HCA4P20448 BMT6YLR063W 1098 nt11.31□□□□□ -0.6
HCA4P20448 YML089CYML089C 369 nt11.31□□□□□ -0.6
HCA4P20448 AAC1YMR056C 930 nt11.29□□□□□ -0.6
HCA4P20448 HIP1YGR191W 1812 nt11.29□□□□□ -0.6
HCA4P20448 GAP1YKR039W 1809 nt11.29□□□□□ -0.6
HCA4P20448 IRC24YIR036C 792 nt11.28□□□□□ -0.6
HCA4P20448 NDI1YML120C 1542 nt11.26□□□□□ -0.61
HCA4P20448 ATG15YCR068W 1563 nt11.26□□□□□ -0.61
HCA4P20448 PEX2YJL210W 816 nt11.26□□□□□ -0.61
HCA4P20448 TIF6YPR016C 738 nt11.25□□□□□ -0.61
HCA4P20448 RPL4BYDR012W 1089 nt11.24□□□□□ -0.61
HCA4P20448 RPL4AYBR031W 1089 nt11.24□□□□□ -0.61
HCA4P20448 RPS14BYJL191W 417 nt11.22□□□□□ -0.61
HCA4P20448 UTR1YJR049C 1593 nt11.21□□□□□ -0.61
HCA4P20448 YMR244WYMR244W 1068 nt11.2□□□□□ -0.62
HCA4P20448 ALG12YNR030W 1656 nt11.2□□□□□ -0.62
HCA4P20448 GLR1YPL091W 1452 nt11.19□□□□□ -0.62
HCA4P20448 UTH1YKR042W 1098 nt11.17□□□□□ -0.62
HCA4P20448 BIO5YNR056C 1686 nt11.17□□□□□ -0.62
HCA4P20448 CLB6YGR109C 1143 nt11.16□□□□□ -0.62
HCA4P20448 DIF1YLR437C 402 nt11.16□□□□□ -0.62
HCA4P20448 MET28YIR017C 564 nt11.15□□□□□ -0.62
HCA4P20448 MCH5YOR306C 1566 nt11.15□□□□□ -0.62
HCA4P20448 NRT1YOR071C 1797 nt11.14□□□□□ -0.63
HCA4P20448 PRM5YIL117C 957 nt11.13□□□□□ -0.63
HCA4P20448 YAR028WYAR028W 705 nt11.03□□□□□ -0.64
HCA4P20448 TSC10YBR265W 963 nt11.03□□□□□ -0.64
HCA4P20448 MTG2YHR168W 1557 nt11.03□□□□□ -0.64
HCA4P20448 FIT3YOR383C 615 nt11.02□□□□□ -0.65
HCA4P20448 HIF1YLL022C 1158 nt11.01□□□□□ -0.65
HCA4P20448 YLR279WYLR279W 390 nt11.01□□□□□ -0.65
HCA4P20448 PBP1YGR178C 2169 nt11□□□□□ -0.65
HCA4P20448 ALD4YOR374W 1560 nt11□□□□□ -0.65
HCA4P20448 CAB5YDR196C 726 nt10.99□□□□□ -0.65
HCA4P20448 YGR012WYGR012W 1182 nt10.99□□□□□ -0.65
HCA4P20448 ZTA1YBR046C 1005 nt10.99□□□□□ -0.65
HCA4P20448 RBG2YGR173W 1107 nt10.98□□□□□ -0.65
HCA4P20448 SAM35YHR083W 990 nt10.97□□□□□ -0.65
HCA4P20448 SDH5YOL071W 489 nt10.97□□□□□ -0.65
HCA4P20448 DBP1YPL119C 1854 nt10.97□□□□□ -0.65
HCA4P20448 RAD23YEL037C 1197 nt10.96□□□□□ -0.65
HCA4P20448 YMR226CYMR226C 804 nt10.96□□□□□ -0.65
HCA4P20448 MSB4YOL112W 1479 nt10.95□□□□□ -0.66
HCA4P20448 ALP1YNL270C 1722 nt10.94□□□□□ -0.66
HCA4P20448 YER190C-AYER190C-A 576 nt10.92□□□□□ -0.66
HCA4P20448 YGR296C-AYGR296C-A 576 nt10.92□□□□□ -0.66
HCA4P20448 YLR437C-AYLR437C-A 228 nt10.92□□□□□ -0.66
HCA4P20448 YML133W-AYML133W-A 576 nt10.92□□□□□ -0.66
HCA4P20448 YNL339W-AYNL339W-A 576 nt10.92□□□□□ -0.66
HCA4P20448 YPL283W-AYPL283W-A 576 nt10.92□□□□□ -0.66
HCA4P20448 AKR2YOR034C 2250 nt10.91□□□□□ -0.66
HCA4P20448 YLR111WYLR111W 333 nt10.9□□□□□ -0.66
HCA4P20448 SED1YDR077W 1017 nt10.88□□□□□ -0.67
HCA4P20448 RIB3YDR487C 627 nt10.87□□□□□ -0.67
HCA4P20448 CYT2YKL087C 675 nt10.86□□□□□ -0.67
HCA4P20448 NAR1YNL240C 1476 nt10.86□□□□□ -0.67
HCA4P20448 YBL086CYBL086C 1401 nt10.84□□□□□ -0.67
HCA4P20448 LIP1YMR298W 453 nt10.84□□□□□ -0.67
HCA4P20448 HXT1YHR094C 1713 nt10.84□□□□□ -0.67
HCA4P20448 YPL251WYPL251W 303 nt10.81□□□□□ -0.68
HCA4P20448 LEU9YOR108W 1815 nt10.8□□□□□ -0.68
HCA4P20448 YPL222C-AYPL222C-A 246 nt10.8□□□□□ -0.68
HCA4P20448 FCY21YER060W 1587 nt10.79□□□□□ -0.68
HCA4P20448 SHY1YGR112W 1170 nt10.77□□□□□ -0.69
HCA4P20448 UGA4YDL210W 1716 nt10.76□□□□□ -0.69
HCA4P20448 UFO1YML088W 2007 nt10.74□□□□□ -0.69
HCA4P20448 ZRT3YKL175W 1512 nt10.74□□□□□ -0.69
HCA4P20448 BRR1YPR057W 1026 nt10.73□□□□□ -0.69
HCA4P20448 GND1YHR183W 1470 nt10.73□□□□□ -0.69
HCA4P20448 RDN25-1RDN25-1 3396 nt10.71□□□□□ -0.69
HCA4P20448 RDN25-2RDN25-2 3396 nt10.71□□□□□ -0.69
HCA4P20448 APT2YDR441C 546 nt10.7□□□□□ -0.7
HCA4P20448 SAM1YLR180W 1149 nt10.69□□□□□ -0.7
HCA4P20448 SMM1YNR015W 1155 nt10.68□□□□□ -0.7
HCA4P20448 LOT5YKL183W 921 nt10.67□□□□□ -0.7
HCA4P20448 RPM1RPM1 483 nt10.67□□□□□ -0.7
HCA4P20448 YAT1YAR035W 2064 nt10.67□□□□□ -0.7
HCA4P20448 TOA2YKL058W 369 nt10.66□□□□□ -0.7
HCA4P20448 YMR103CYMR103C 363 nt10.66□□□□□ -0.7
HCA4P20448 MEP3YPR138C 1470 nt10.66□□□□□ -0.7
HCA4P20448 YJL067WYJL067W 351 nt10.65□□□□□ -0.7
HCA4P20448 URA6YKL024C 615 nt10.65□□□□□ -0.7
HCA4P20448 TRT2tT(CGU)K 72 nt10.62□□□□□ -0.71
HCA4P20448 PRY1YJL079C 900 nt10.62□□□□□ -0.71
HCA4P20448 GND2YGR256W 1479 nt10.61□□□□□ -0.71
HCA4P20448 YPI1YFR003C 468 nt10.59□□□□□ -0.71
HCA4P20448 ADH1YOL086C 1047 nt10.59□□□□□ -0.71
HCA4P20448 HSL7YBR133C 2484 nt10.58□□□□□ -0.72
HCA4P20448 CSM1YCR086W 573 nt10.58□□□□□ -0.72
HCA4P20448 YNR029CYNR029C 1290 nt10.58□□□□□ -0.72
HCA4P20448 OYE3YPL171C 1203 nt10.57□□□□□ -0.72
HCA4P20448 HXT12YIL170W 1374 nt10.56□□□□□ -0.72
HCA4P20448 SSN3YPL042C 1668 nt10.54□□□□□ -0.72
HCA4P20448 PHO23YNL097C 993 nt10.54□□□□□ -0.72
Retrieved 100 of 7,029 protein–RNA pairs in 33 ms