Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
RBFOX3A6NFN3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RBFOX3A6NFN3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.57■■□□□ 1.04
RBFOX3A6NFN3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RBFOX3A6NFN3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RBFOX3A6NFN3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
RBFOX3A6NFN3 AC120057.4-201ENST00000624722 1615 ntBASIC21.56■■□□□ 1.04
RBFOX3A6NFN3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RBFOX3A6NFN3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.55■■□□□ 1.04
RBFOX3A6NFN3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RBFOX3A6NFN3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
RBFOX3A6NFN3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RBFOX3A6NFN3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.54■■□□□ 1.04
RBFOX3A6NFN3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RBFOX3A6NFN3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RBFOX3A6NFN3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RBFOX3A6NFN3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBFOX3A6NFN3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RBFOX3A6NFN3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
RBFOX3A6NFN3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBFOX3A6NFN3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RBFOX3A6NFN3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RBFOX3A6NFN3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.5■■□□□ 1.03
RBFOX3A6NFN3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RBFOX3A6NFN3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.48■■□□□ 1.03
RBFOX3A6NFN3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RBFOX3A6NFN3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RBFOX3A6NFN3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.47■■□□□ 1.03
RBFOX3A6NFN3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
RBFOX3A6NFN3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RBFOX3A6NFN3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RBFOX3A6NFN3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RBFOX3A6NFN3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
RBFOX3A6NFN3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RBFOX3A6NFN3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RBFOX3A6NFN3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RBFOX3A6NFN3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RBFOX3A6NFN3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.43■■□□□ 1.02
RBFOX3A6NFN3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.43■■□□□ 1.02
RBFOX3A6NFN3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RBFOX3A6NFN3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RBFOX3A6NFN3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.41■■□□□ 1.02
RBFOX3A6NFN3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RBFOX3A6NFN3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.41■■□□□ 1.02
RBFOX3A6NFN3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RBFOX3A6NFN3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.38■■□□□ 1.01
RBFOX3A6NFN3 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RBFOX3A6NFN3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RBFOX3A6NFN3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RBFOX3A6NFN3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.37■■□□□ 1.01
RBFOX3A6NFN3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RBFOX3A6NFN3 AC142086.6-201ENST00000621154 1765 ntBASIC21.36■■□□□ 1.01
RBFOX3A6NFN3 AC135731.1-201ENST00000569415 2548 ntBASIC21.36■■□□□ 1.01
RBFOX3A6NFN3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RBFOX3A6NFN3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
RBFOX3A6NFN3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.35■■□□□ 1.01
RBFOX3A6NFN3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RBFOX3A6NFN3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RBFOX3A6NFN3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RBFOX3A6NFN3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.33■■□□□ 1
RBFOX3A6NFN3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.33■■□□□ 1
RBFOX3A6NFN3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RBFOX3A6NFN3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.32■■□□□ 1
RBFOX3A6NFN3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.32■■□□□ 1
RBFOX3A6NFN3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RBFOX3A6NFN3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.31■■□□□ 1
RBFOX3A6NFN3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.31■■□□□ 1
RBFOX3A6NFN3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RBFOX3A6NFN3 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RBFOX3A6NFN3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.29■■□□□ 1
RBFOX3A6NFN3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.29■■□□□ 1
RBFOX3A6NFN3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RBFOX3A6NFN3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RBFOX3A6NFN3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.27■■□□□ 1
RBFOX3A6NFN3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RBFOX3A6NFN3 ST7-AS1-201ENST00000456775 1889 ntBASIC21.26■□□□□ 0.99
RBFOX3A6NFN3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RBFOX3A6NFN3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RBFOX3A6NFN3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RBFOX3A6NFN3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC21.25■□□□□ 0.99
RBFOX3A6NFN3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.24■□□□□ 0.99
RBFOX3A6NFN3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RBFOX3A6NFN3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.24■□□□□ 0.99
RBFOX3A6NFN3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.23■□□□□ 0.99
RBFOX3A6NFN3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RBFOX3A6NFN3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RBFOX3A6NFN3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RBFOX3A6NFN3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBFOX3A6NFN3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RBFOX3A6NFN3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC21.22■□□□□ 0.99
RBFOX3A6NFN3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RBFOX3A6NFN3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.21■□□□□ 0.99
RBFOX3A6NFN3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RBFOX3A6NFN3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
RBFOX3A6NFN3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RBFOX3A6NFN3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RBFOX3A6NFN3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RBFOX3A6NFN3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RBFOX3A6NFN3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBFOX3A6NFN3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms