Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
RBFOX3A6NFN3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RBFOX3A6NFN3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.57■■□□□ 1.04
RBFOX3A6NFN3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RBFOX3A6NFN3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RBFOX3A6NFN3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
RBFOX3A6NFN3 AC120057.4-201ENST00000624722 1615 ntBASIC21.56■■□□□ 1.04
RBFOX3A6NFN3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RBFOX3A6NFN3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC21.55■■□□□ 1.04
RBFOX3A6NFN3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RBFOX3A6NFN3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
RBFOX3A6NFN3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RBFOX3A6NFN3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.54■■□□□ 1.04
RBFOX3A6NFN3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RBFOX3A6NFN3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RBFOX3A6NFN3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RBFOX3A6NFN3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBFOX3A6NFN3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RBFOX3A6NFN3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
RBFOX3A6NFN3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBFOX3A6NFN3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RBFOX3A6NFN3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RBFOX3A6NFN3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.5■■□□□ 1.03
RBFOX3A6NFN3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RBFOX3A6NFN3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.48■■□□□ 1.03
RBFOX3A6NFN3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RBFOX3A6NFN3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RBFOX3A6NFN3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.47■■□□□ 1.03
RBFOX3A6NFN3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
RBFOX3A6NFN3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RBFOX3A6NFN3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RBFOX3A6NFN3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RBFOX3A6NFN3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
RBFOX3A6NFN3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RBFOX3A6NFN3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RBFOX3A6NFN3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RBFOX3A6NFN3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RBFOX3A6NFN3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.43■■□□□ 1.02
RBFOX3A6NFN3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.43■■□□□ 1.02
RBFOX3A6NFN3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RBFOX3A6NFN3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RBFOX3A6NFN3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.41■■□□□ 1.02
RBFOX3A6NFN3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RBFOX3A6NFN3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.41■■□□□ 1.02
RBFOX3A6NFN3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RBFOX3A6NFN3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC21.38■■□□□ 1.01
RBFOX3A6NFN3 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RBFOX3A6NFN3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RBFOX3A6NFN3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RBFOX3A6NFN3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.37■■□□□ 1.01
RBFOX3A6NFN3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RBFOX3A6NFN3 AC142086.6-201ENST00000621154 1765 ntBASIC21.36■■□□□ 1.01
RBFOX3A6NFN3 AC135731.1-201ENST00000569415 2548 ntBASIC21.36■■□□□ 1.01
RBFOX3A6NFN3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RBFOX3A6NFN3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
RBFOX3A6NFN3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.35■■□□□ 1.01
RBFOX3A6NFN3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RBFOX3A6NFN3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RBFOX3A6NFN3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RBFOX3A6NFN3 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC21.33■■□□□ 1
RBFOX3A6NFN3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.33■■□□□ 1
RBFOX3A6NFN3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RBFOX3A6NFN3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.32■■□□□ 1
RBFOX3A6NFN3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.32■■□□□ 1
RBFOX3A6NFN3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RBFOX3A6NFN3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.31■■□□□ 1
RBFOX3A6NFN3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.31■■□□□ 1
RBFOX3A6NFN3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RBFOX3A6NFN3 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RBFOX3A6NFN3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.29■■□□□ 1
RBFOX3A6NFN3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC21.29■■□□□ 1
RBFOX3A6NFN3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RBFOX3A6NFN3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RBFOX3A6NFN3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.27■■□□□ 1
RBFOX3A6NFN3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RBFOX3A6NFN3 ST7-AS1-201ENST00000456775 1889 ntBASIC21.26■□□□□ 0.99
RBFOX3A6NFN3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RBFOX3A6NFN3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RBFOX3A6NFN3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RBFOX3A6NFN3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC21.25■□□□□ 0.99
RBFOX3A6NFN3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.24■□□□□ 0.99
RBFOX3A6NFN3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RBFOX3A6NFN3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.24■□□□□ 0.99
RBFOX3A6NFN3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.23■□□□□ 0.99
RBFOX3A6NFN3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RBFOX3A6NFN3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RBFOX3A6NFN3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RBFOX3A6NFN3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RBFOX3A6NFN3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RBFOX3A6NFN3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC21.22■□□□□ 0.99
RBFOX3A6NFN3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RBFOX3A6NFN3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.21■□□□□ 0.99
RBFOX3A6NFN3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RBFOX3A6NFN3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
RBFOX3A6NFN3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RBFOX3A6NFN3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RBFOX3A6NFN3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RBFOX3A6NFN3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RBFOX3A6NFN3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RBFOX3A6NFN3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms