Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 FAM230A-201ENST00000615181 315 ntTSL 5 BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 LINC00963-216ENST00000623185 786 ntTSL 5 BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 MEI1-201ENST00000401548 4020 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 ST5-258ENST00000534278 1352 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 WDR78-201ENST00000371022 1520 ntTSL 5 BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 PCDHGB6-201ENST00000520790 4599 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 MRPL45-204ENST00000619548 1554 ntTSL 3 BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 MTMR2-202ENST00000352297 3350 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 AL590434.1-201ENST00000641402 1886 ntBASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 DDX25-201ENST00000263576 7555 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 IQCC-201ENST00000291358 2027 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 PSG9-201ENST00000244293 2073 ntTSL 2 BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 MYT1-205ENST00000622439 2140 ntTSL 5 BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 ZNF274-201ENST00000326804 2447 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
NPIPA3F8WFD2 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 PDCD6IP-206ENST00000457054 5962 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 AC134682.1-201ENST00000569285 3377 ntBASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 CD300LB-201ENST00000314401 993 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 TPM3P7-201ENST00000338274 732 ntBASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 LILRB4-202ENST00000391733 1742 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 AL356583.3-201ENST00000412354 417 ntBASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 PRAMEF9-201ENST00000415919 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 AC004870.4-202ENST00000433337 455 ntTSL 3 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 MRO-205ENST00000436348 1125 ntTSL 5 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 YBX1P7-201ENST00000436766 535 ntBASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 OR7E33P-201ENST00000437705 966 ntBASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 CHCHD2P6-201ENST00000454346 447 ntBASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 MTND6P9-201ENST00000458075 519 ntBASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 RN7SL43P-201ENST00000463926 291 ntBASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 LEMD2-207ENST00000508327 1306 ntTSL 2 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 PDPN-210ENST00000513143 1305 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 AC142391.1-201ENST00000515823 1002 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 NPIPP1-202ENST00000534799 1214 ntTSL 3 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 AL078590.3-201ENST00000607531 750 ntTSL 3 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 HSH2D-206ENST00000613986 1957 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 AL590483.3-201ENST00000623669 3580 ntBASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 UBA3-212ENST00000630585 390 ntTSL 4 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 AC006581.2-201ENST00000631830 455 ntTSL 3 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 AL139424.2-202ENST00000641335 1369 ntBASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 AKAP10-201ENST00000225737 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 AC011511.5-201ENST00000589379 3219 ntBASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 ZNF583-201ENST00000291598 2538 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
NPIPA3F8WFD2 PCCB-214ENST00000478469 4502 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NPIPA3F8WFD2 AC080013.1-204ENST00000607426 2185 ntBASIC11.21□□□□□ -0.61
NPIPA3F8WFD2 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
NPIPA3F8WFD2 PAX3-202ENST00000336840 2038 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NPIPA3F8WFD2 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
NPIPA3F8WFD2 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC11.21□□□□□ -0.61
NPIPA3F8WFD2 RPL13AP17-204ENST00000450028 1895 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NPIPA3F8WFD2 KCND3-203ENST00000369697 7396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
NPIPA3F8WFD2 ESPNL-206ENST00000612395 3673 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NPIPA3F8WFD2 SIGLEC10-209ENST00000525998 1841 ntTSL 2 BASIC11.21□□□□□ -0.61
NPIPA3F8WFD2 AL162591.1-201ENST00000424435 1756 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
NPIPA3F8WFD2 KBTBD6-201ENST00000379485 5178 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms