Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 DCTN2-201ENST00000434715 1677 ntTSL 5 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 C10orf128-203ENST00000374153 1569 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 AC005070.3-201ENST00000607968 2646 ntBASIC12.99□□□□□ -0.33
LMO3Q8TAP4 GBE1-201ENST00000429644 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 AC091198.1-201ENST00000591558 2492 ntTSL 5 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 NIP7-201ENST00000254940 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 AC024614.4-201ENST00000637454 2396 ntTSL 5 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 USP5-202ENST00000389231 3083 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 TBC1D3P3-201ENST00000342824 1080 ntBASIC12.99□□□□□ -0.33
LMO3Q8TAP4 KLK8-203ENST00000347619 555 ntTSL 2 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 IGKV6-21-201ENST00000390256 406 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 AC010240.1-201ENST00000429606 459 ntBASIC12.99□□□□□ -0.33
LMO3Q8TAP4 LINC00106-201ENST00000430235 370 ntTSL 2 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 MRO-205ENST00000436348 1125 ntTSL 5 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 CD79A-202ENST00000444740 567 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 COQ5-202ENST00000445328 992 ntTSL 2 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 RN7SL33P-201ENST00000462543 342 ntBASIC12.99□□□□□ -0.33
LMO3Q8TAP4 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 MTND6P4-201ENST00000506002 522 ntBASIC12.99□□□□□ -0.33
LMO3Q8TAP4 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 OR7E14P-201ENST00000526721 1000 ntBASIC12.99□□□□□ -0.33
LMO3Q8TAP4 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 IGHV1OR16-3-201ENST00000568138 205 ntBASIC12.99□□□□□ -0.33
LMO3Q8TAP4 AC005154.1-227ENST00000579174 755 ntTSL 3 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 AC005154.1-204ENST00000580902 926 ntTSL 4 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 AC116036.2-201ENST00000607592 462 ntBASIC12.99□□□□□ -0.33
LMO3Q8TAP4 NOL12-201ENST00000359114 2854 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 RALA-201ENST00000005257 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 TFIP11-202ENST00000407148 2789 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 FAM160A1-201ENST00000435205 4576 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 USP6NL-206ENST00000609853 1748 ntTSL 4 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
LMO3Q8TAP4 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 IMMT-207ENST00000449247 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 PAX5-205ENST00000377853 1487 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 IL1RL2-203ENST00000441515 1484 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 FLNB-203ENST00000419752 2002 ntTSL 5 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 ATP4A-201ENST00000262623 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 DGKZ-220ENST00000532868 3118 ntTSL 2 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 MTFR1L-210ENST00000474295 1873 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 SC5D-208ENST00000534230 1861 ntTSL 5 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 DGKA-201ENST00000331886 2909 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 MRS2-203ENST00000378386 3313 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 IFNA6-201ENST00000259555 704 ntBASIC12.98□□□□□ -0.33
LMO3Q8TAP4 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 AL021068.1-201ENST00000392097 911 ntBASIC12.98□□□□□ -0.33
LMO3Q8TAP4 ATP5G2-202ENST00000394349 878 ntTSL 2 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 AC005102.1-201ENST00000403118 479 ntBASIC12.98□□□□□ -0.33
LMO3Q8TAP4 TMEM18-203ENST00000405941 654 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 LINC01849-201ENST00000414647 517 ntTSL 4 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 BANF1P4-201ENST00000420029 270 ntBASIC12.98□□□□□ -0.33
LMO3Q8TAP4 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 PIN1P1-202ENST00000439639 301 ntBASIC12.98□□□□□ -0.33
LMO3Q8TAP4 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 TRPC7-AS2-201ENST00000513958 706 ntTSL 5 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 AC009779.7-201ENST00000609031 469 ntBASIC12.98□□□□□ -0.33
LMO3Q8TAP4 Metazoa_SRP.95-201ENST00000619648 282 ntBASIC12.98□□□□□ -0.33
LMO3Q8TAP4 M6PR-201ENST00000000412 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 SEC24A-201ENST00000322887 2700 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 WFS1-201ENST00000226760 3640 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 ELMO2-204ENST00000396391 3574 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 LMCD1-AS1-201ENST00000420095 2144 ntTSL 2 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 ELP4-222ENST00000640231 2062 ntTSL 5 BASIC12.98□□□□□ -0.33
LMO3Q8TAP4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms