Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PCLAF-201ENST00000300035 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 OR10D5P-201ENST00000392760 915 ntBASIC12.92□□□□□ -0.34
MTHFRP42898 CCL26-202ENST00000394905 703 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 C22orf15-203ENST00000402217 829 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
MTHFRP42898 C2orf70-202ENST00000409392 764 ntTSL 3 BASIC12.92□□□□□ -0.34
MTHFRP42898 AC245128.2-201ENST00000412970 284 ntBASIC12.92□□□□□ -0.34
MTHFRP42898 SWI5-204ENST00000419867 1048 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 TSEN15P3-201ENST00000422363 367 ntBASIC12.92□□□□□ -0.34
MTHFRP42898 AC244453.1-201ENST00000427872 494 ntTSL 3 BASIC12.92□□□□□ -0.34
MTHFRP42898 CSTF3-203ENST00000438862 1132 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 RPS18-230ENST00000439602 613 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 YBX1P9-201ENST00000441264 679 ntBASIC12.92□□□□□ -0.34
MTHFRP42898 IP6K3-202ENST00000451316 2012 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
MTHFRP42898 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC12.92□□□□□ -0.34
MTHFRP42898 TCP10L-202ENST00000472557 732 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
MTHFRP42898 RPS18-233ENST00000474973 589 ntTSL 2 BASIC12.92□□□□□ -0.34
MTHFRP42898 RN7SL743P-201ENST00000475032 298 ntBASIC12.92□□□□□ -0.34
MTHFRP42898 TAGLN3-206ENST00000486460 920 ntTSL 5 BASIC12.92□□□□□ -0.34
MTHFRP42898 ZNHIT1P1-201ENST00000523947 444 ntBASIC12.92□□□□□ -0.34
MTHFRP42898 OR4A18P-201ENST00000529103 1088 ntBASIC12.92□□□□□ -0.34
MTHFRP42898 AC022150.2-201ENST00000596451 644 ntTSL 3 BASIC12.92□□□□□ -0.34
MTHFRP42898 AC093159.2-201ENST00000603429 636 ntBASIC12.92□□□□□ -0.34
MTHFRP42898 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
MTHFRP42898 AL627230.4-201ENST00000617851 370 ntBASIC12.92□□□□□ -0.34
MTHFRP42898 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC12.92□□□□□ -0.34
MTHFRP42898 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
MTHFRP42898 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC12.92□□□□□ -0.34
MTHFRP42898 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
MTHFRP42898 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC12.92□□□□□ -0.34
MTHFRP42898 ZNF215-207ENST00000610573 1503 ntTSL 5 BASIC12.92□□□□□ -0.34
MTHFRP42898 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.92□□□□□ -0.34
MTHFRP42898 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MTHFRP42898 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.91□□□□□ -0.34
MTHFRP42898 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
MTHFRP42898 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
MTHFRP42898 IQCC-201ENST00000291358 2027 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
MTHFRP42898 TSTA3-210ENST00000529064 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MTHFRP42898 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC12.91□□□□□ -0.34
MTHFRP42898 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
MTHFRP42898 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
MTHFRP42898 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
MTHFRP42898 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
MTHFRP42898 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MTHFRP42898 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MTHFRP42898 HYPK-203ENST00000458412 1712 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
MTHFRP42898 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
MTHFRP42898 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
MTHFRP42898 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
MTHFRP42898 OR13C9-201ENST00000259362 957 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
MTHFRP42898 IGKV2D-26-201ENST00000390268 390 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
MTHFRP42898 CCDC103-203ENST00000410027 571 ntTSL 4 BASIC12.91□□□□□ -0.34
MTHFRP42898 MRPL45P2-201ENST00000425159 927 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MTHFRP42898 IFT22-204ENST00000437644 875 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MTHFRP42898 AL139412.1-201ENST00000441085 523 ntTSL 2 BASIC12.91□□□□□ -0.34
MTHFRP42898 ST3GAL6-207ENST00000468553 715 ntTSL 3 BASIC12.91□□□□□ -0.34
MTHFRP42898 ITIH4-AS1-201ENST00000478366 395 ntTSL 3 BASIC12.91□□□□□ -0.34
MTHFRP42898 GPR79-201ENST00000498175 868 ntBASIC12.91□□□□□ -0.34
MTHFRP42898 AC021678.2-201ENST00000521731 887 ntTSL 2 BASIC12.91□□□□□ -0.34
MTHFRP42898 LINC02450-201ENST00000550177 1003 ntTSL 2 BASIC12.91□□□□□ -0.34
MTHFRP42898 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC12.91□□□□□ -0.34
MTHFRP42898 AC009034.1-201ENST00000568125 669 ntTSL 2 BASIC12.91□□□□□ -0.34
MTHFRP42898 AC022966.2-201ENST00000587434 367 ntBASIC12.91□□□□□ -0.34
MTHFRP42898 TMED1-204ENST00000588289 541 ntTSL 2 BASIC12.91□□□□□ -0.34
MTHFRP42898 AL590096.1-202ENST00000618162 580 ntTSL 3 BASIC12.91□□□□□ -0.34
MTHFRP42898 AC091167.7-201ENST00000622269 518 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
MTHFRP42898 AC004494.2-201ENST00000623168 830 ntBASIC12.91□□□□□ -0.34
MTHFRP42898 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MTHFRP42898 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
MTHFRP42898 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MTHFRP42898 AC020629.1-201ENST00000550858 1650 ntBASIC12.91□□□□□ -0.34
MTHFRP42898 AC091181.1-201ENST00000623762 2098 ntBASIC12.91□□□□□ -0.34
MTHFRP42898 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC12.91□□□□□ -0.34
MTHFRP42898 NLK-203ENST00000582037 1503 ntTSL 2 BASIC12.91□□□□□ -0.34
MTHFRP42898 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC12.91□□□□□ -0.34
MTHFRP42898 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
MTHFRP42898 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
MTHFRP42898 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
MTHFRP42898 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.91□□□□□ -0.34
MTHFRP42898 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
MTHFRP42898 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MTHFRP42898 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MTHFRP42898 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
MTHFRP42898 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
MTHFRP42898 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC12.91□□□□□ -0.34
MTHFRP42898 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MTHFRP42898 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MTHFRP42898 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC12.91□□□□□ -0.34
MTHFRP42898 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
MTHFRP42898 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms