Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CLCA3PQ9Y6N3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCA3PQ9Y6N3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLCA3PQ9Y6N3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCA3PQ9Y6N3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CLCA3PQ9Y6N3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLCA3PQ9Y6N3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
CLCA3PQ9Y6N3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.41■□□□□ 0.86
CLCA3PQ9Y6N3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CLCA3PQ9Y6N3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.41■□□□□ 0.86
CLCA3PQ9Y6N3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.41■□□□□ 0.86
CLCA3PQ9Y6N3 AC010141.3-201ENST00000456659 717 ntBASIC20.41■□□□□ 0.86
CLCA3PQ9Y6N3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.41■□□□□ 0.86
CLCA3PQ9Y6N3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.41■□□□□ 0.86
CLCA3PQ9Y6N3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.41■□□□□ 0.86
CLCA3PQ9Y6N3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLCA3PQ9Y6N3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.41■□□□□ 0.86
CLCA3PQ9Y6N3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CLCA3PQ9Y6N3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.41■□□□□ 0.86
CLCA3PQ9Y6N3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCA3PQ9Y6N3 IRS3P-201ENST00000223076 1006 ntBASIC20.4■□□□□ 0.86
CLCA3PQ9Y6N3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
CLCA3PQ9Y6N3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCA3PQ9Y6N3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.4■□□□□ 0.86
CLCA3PQ9Y6N3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.4■□□□□ 0.86
CLCA3PQ9Y6N3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.4■□□□□ 0.86
CLCA3PQ9Y6N3 ZNRF2P3-201ENST00000424200 374 ntBASIC20.4■□□□□ 0.86
CLCA3PQ9Y6N3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CLCA3PQ9Y6N3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLCA3PQ9Y6N3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLCA3PQ9Y6N3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLCA3PQ9Y6N3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLCA3PQ9Y6N3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CLCA3PQ9Y6N3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLCA3PQ9Y6N3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCA3PQ9Y6N3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCA3PQ9Y6N3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCA3PQ9Y6N3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCA3PQ9Y6N3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.39■□□□□ 0.85
CLCA3PQ9Y6N3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCA3PQ9Y6N3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCA3PQ9Y6N3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCA3PQ9Y6N3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.39■□□□□ 0.85
CLCA3PQ9Y6N3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CLCA3PQ9Y6N3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCA3PQ9Y6N3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCA3PQ9Y6N3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLCA3PQ9Y6N3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CLCA3PQ9Y6N3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.38■□□□□ 0.85
CLCA3PQ9Y6N3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCA3PQ9Y6N3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLCA3PQ9Y6N3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCA3PQ9Y6N3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCA3PQ9Y6N3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLCA3PQ9Y6N3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCA3PQ9Y6N3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCA3PQ9Y6N3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
CLCA3PQ9Y6N3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCA3PQ9Y6N3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLCA3PQ9Y6N3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCA3PQ9Y6N3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.38■□□□□ 0.85
CLCA3PQ9Y6N3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLCA3PQ9Y6N3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLCA3PQ9Y6N3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.37■□□□□ 0.85
CLCA3PQ9Y6N3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLCA3PQ9Y6N3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.37■□□□□ 0.85
CLCA3PQ9Y6N3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CLCA3PQ9Y6N3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.37■□□□□ 0.85
CLCA3PQ9Y6N3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.37■□□□□ 0.85
CLCA3PQ9Y6N3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.37■□□□□ 0.85
CLCA3PQ9Y6N3 LINC00565-201ENST00000562710 2331 ntBASIC20.37■□□□□ 0.85
CLCA3PQ9Y6N3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLCA3PQ9Y6N3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCA3PQ9Y6N3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCA3PQ9Y6N3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCA3PQ9Y6N3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCA3PQ9Y6N3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCA3PQ9Y6N3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCA3PQ9Y6N3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCA3PQ9Y6N3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.36■□□□□ 0.85
CLCA3PQ9Y6N3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.36■□□□□ 0.85
CLCA3PQ9Y6N3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.36■□□□□ 0.85
CLCA3PQ9Y6N3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.36■□□□□ 0.85
CLCA3PQ9Y6N3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCA3PQ9Y6N3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CLCA3PQ9Y6N3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLCA3PQ9Y6N3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.36■□□□□ 0.85
CLCA3PQ9Y6N3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.35■□□□□ 0.85
CLCA3PQ9Y6N3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCA3PQ9Y6N3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.35■□□□□ 0.85
CLCA3PQ9Y6N3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCA3PQ9Y6N3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCA3PQ9Y6N3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCA3PQ9Y6N3 MIR572-201ENST00000384983 95 ntBASIC20.35■□□□□ 0.85
CLCA3PQ9Y6N3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.35■□□□□ 0.85
CLCA3PQ9Y6N3 OXCT2P1-201ENST00000447263 1535 ntBASIC20.35■□□□□ 0.85
CLCA3PQ9Y6N3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CLCA3PQ9Y6N3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCA3PQ9Y6N3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCA3PQ9Y6N3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms