Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 AC144652.1-201ENST00000609974 1624 ntBASIC20.38■□□□□ 0.85
PCDHGB6Q9Y5F9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 GUSBP5-202ENST00000510805 1989 ntBASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 AL358852.1-201ENST00000623174 1268 ntBASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGB6Q9Y5F9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB6Q9Y5F9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCDHGB6Q9Y5F9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PCDHGB6Q9Y5F9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGB6Q9Y5F9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHGB6Q9Y5F9 LINC01529-204ENST00000636474 1715 ntBASIC20.36■□□□□ 0.85
PCDHGB6Q9Y5F9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGB6Q9Y5F9 TSPY26P-201ENST00000476365 1326 ntBASIC20.36■□□□□ 0.85
PCDHGB6Q9Y5F9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGB6Q9Y5F9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB6Q9Y5F9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHGB6Q9Y5F9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB6Q9Y5F9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PCDHGB6Q9Y5F9 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGB6Q9Y5F9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB6Q9Y5F9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
PCDHGB6Q9Y5F9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB6Q9Y5F9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB6Q9Y5F9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHGB6Q9Y5F9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGB6Q9Y5F9 MIR572-201ENST00000384983 95 ntBASIC20.35■□□□□ 0.85
PCDHGB6Q9Y5F9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PCDHGB6Q9Y5F9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PCDHGB6Q9Y5F9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 AC079630.1-202ENST00000618127 1840 ntBASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 ECEL1P1-201ENST00000373592 1742 ntBASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 AL162430.1-201ENST00000480705 870 ntBASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PCDHGB6Q9Y5F9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB6Q9Y5F9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PCDHGB6Q9Y5F9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.33■□□□□ 0.85
PCDHGB6Q9Y5F9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
PCDHGB6Q9Y5F9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB6Q9Y5F9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHGB6Q9Y5F9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB6Q9Y5F9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB6Q9Y5F9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB6Q9Y5F9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDHGB6Q9Y5F9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB6Q9Y5F9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB6Q9Y5F9 YBX1P1-201ENST00000445822 960 ntBASIC20.33■□□□□ 0.85
PCDHGB6Q9Y5F9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGB6Q9Y5F9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
PCDHGB6Q9Y5F9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGB6Q9Y5F9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGB6Q9Y5F9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
PCDHGB6Q9Y5F9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.33■□□□□ 0.84
PCDHGB6Q9Y5F9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB6Q9Y5F9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB6Q9Y5F9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHGB6Q9Y5F9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB6Q9Y5F9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PCDHGB6Q9Y5F9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB6Q9Y5F9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGB6Q9Y5F9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PCDHGB6Q9Y5F9 AC027612.3-201ENST00000413684 1047 ntBASIC20.32■□□□□ 0.84
PCDHGB6Q9Y5F9 AC123595.1-201ENST00000440769 1046 ntBASIC20.32■□□□□ 0.84
PCDHGB6Q9Y5F9 AP005435.1-201ENST00000529293 1178 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms