Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PCDHB1Q9Y5F3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHB1Q9Y5F3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB1Q9Y5F3 AC079834.2-201ENST00000609776 1949 ntBASIC21.68■■□□□ 1.06
PCDHB1Q9Y5F3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB1Q9Y5F3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB1Q9Y5F3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB1Q9Y5F3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB1Q9Y5F3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB1Q9Y5F3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB1Q9Y5F3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
PCDHB1Q9Y5F3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB1Q9Y5F3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB1Q9Y5F3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHB1Q9Y5F3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHB1Q9Y5F3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHB1Q9Y5F3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHB1Q9Y5F3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB1Q9Y5F3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB1Q9Y5F3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB1Q9Y5F3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB1Q9Y5F3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 SLC47A1P1-202ENST00000449666 945 ntBASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PCDHB1Q9Y5F3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 AC068587.7-201ENST00000641602 218 ntBASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB1Q9Y5F3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHB1Q9Y5F3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHB1Q9Y5F3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHB1Q9Y5F3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHB1Q9Y5F3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB1Q9Y5F3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB1Q9Y5F3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
PCDHB1Q9Y5F3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHB1Q9Y5F3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PCDHB1Q9Y5F3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHB1Q9Y5F3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PCDHB1Q9Y5F3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.64■■□□□ 1.05
PCDHB1Q9Y5F3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHB1Q9Y5F3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDHB1Q9Y5F3 MIR6084-201ENST00000622012 110 ntBASIC21.64■■□□□ 1.05
PCDHB1Q9Y5F3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB1Q9Y5F3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB1Q9Y5F3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PCDHB1Q9Y5F3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB1Q9Y5F3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB1Q9Y5F3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
PCDHB1Q9Y5F3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB1Q9Y5F3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
PCDHB1Q9Y5F3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB1Q9Y5F3 LINC00526-201ENST00000581067 1875 ntBASIC21.63■■□□□ 1.05
PCDHB1Q9Y5F3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PCDHB1Q9Y5F3 AC004911.1-201ENST00000416316 871 ntBASIC21.63■■□□□ 1.05
PCDHB1Q9Y5F3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB1Q9Y5F3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.63■■□□□ 1.05
PCDHB1Q9Y5F3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB1Q9Y5F3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PCDHB1Q9Y5F3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB1Q9Y5F3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB1Q9Y5F3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHB1Q9Y5F3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB1Q9Y5F3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB1Q9Y5F3 AC080038.3-201ENST00000623346 1952 ntBASIC21.62■■□□□ 1.05
PCDHB1Q9Y5F3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.62■■□□□ 1.05
PCDHB1Q9Y5F3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB1Q9Y5F3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms