Protein–RNA interactions for Protein: Q9Y4X3

CCL27, C-C motif chemokine 27, humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL27Q9Y4X3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCL27Q9Y4X3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.79■□□□□ 0.92
CCL27Q9Y4X3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.79■□□□□ 0.92
CCL27Q9Y4X3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL27Q9Y4X3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL27Q9Y4X3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL27Q9Y4X3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL27Q9Y4X3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCL27Q9Y4X3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL27Q9Y4X3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL27Q9Y4X3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL27Q9Y4X3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
CCL27Q9Y4X3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.78■□□□□ 0.92
CCL27Q9Y4X3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL27Q9Y4X3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.78■□□□□ 0.92
CCL27Q9Y4X3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL27Q9Y4X3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CCL27Q9Y4X3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CCL27Q9Y4X3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCL27Q9Y4X3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CCL27Q9Y4X3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
CCL27Q9Y4X3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
CCL27Q9Y4X3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CCL27Q9Y4X3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CCL27Q9Y4X3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCL27Q9Y4X3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCL27Q9Y4X3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCL27Q9Y4X3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.77■□□□□ 0.91
CCL27Q9Y4X3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCL27Q9Y4X3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCL27Q9Y4X3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.77■□□□□ 0.91
CCL27Q9Y4X3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCL27Q9Y4X3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCL27Q9Y4X3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.76■□□□□ 0.91
CCL27Q9Y4X3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.76■□□□□ 0.91
CCL27Q9Y4X3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCL27Q9Y4X3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CCL27Q9Y4X3 SRD5A1P1-201ENST00000442297 786 ntBASIC20.76■□□□□ 0.91
CCL27Q9Y4X3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.76■□□□□ 0.91
CCL27Q9Y4X3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.76■□□□□ 0.91
CCL27Q9Y4X3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CCL27Q9Y4X3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.76■□□□□ 0.91
CCL27Q9Y4X3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
CCL27Q9Y4X3 AC026471.6-201ENST00000622954 1905 ntBASIC20.76■□□□□ 0.91
CCL27Q9Y4X3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCL27Q9Y4X3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCL27Q9Y4X3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CCL27Q9Y4X3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCL27Q9Y4X3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.75■□□□□ 0.91
CCL27Q9Y4X3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCL27Q9Y4X3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCL27Q9Y4X3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCL27Q9Y4X3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.75■□□□□ 0.91
CCL27Q9Y4X3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.75■□□□□ 0.91
CCL27Q9Y4X3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.75■□□□□ 0.91
CCL27Q9Y4X3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.75■□□□□ 0.91
CCL27Q9Y4X3 AC068587.7-201ENST00000641602 218 ntBASIC20.75■□□□□ 0.91
CCL27Q9Y4X3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCL27Q9Y4X3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.75■□□□□ 0.91
CCL27Q9Y4X3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCL27Q9Y4X3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CCL27Q9Y4X3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCL27Q9Y4X3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCL27Q9Y4X3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CCL27Q9Y4X3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.74■□□□□ 0.91
CCL27Q9Y4X3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCL27Q9Y4X3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CCL27Q9Y4X3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCL27Q9Y4X3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCL27Q9Y4X3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.74■□□□□ 0.91
CCL27Q9Y4X3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCL27Q9Y4X3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCL27Q9Y4X3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCL27Q9Y4X3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.74■□□□□ 0.91
CCL27Q9Y4X3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.74■□□□□ 0.91
CCL27Q9Y4X3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 AL356441.2-201ENST00000443009 864 ntBASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 AC010525.1-201ENST00000585559 441 ntBASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CCL27Q9Y4X3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.72■□□□□ 0.91
CCL27Q9Y4X3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.72■□□□□ 0.91
CCL27Q9Y4X3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCL27Q9Y4X3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCL27Q9Y4X3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCL27Q9Y4X3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms