Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT52Q9Y366 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
IFT52Q9Y366 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.22■□□□□ 0.83
IFT52Q9Y366 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.22■□□□□ 0.83
IFT52Q9Y366 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT52Q9Y366 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
IFT52Q9Y366 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.22■□□□□ 0.83
IFT52Q9Y366 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT52Q9Y366 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IFT52Q9Y366 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFT52Q9Y366 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFT52Q9Y366 MIR3621-201ENST00000580529 85 ntBASIC20.21■□□□□ 0.83
IFT52Q9Y366 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.21■□□□□ 0.83
IFT52Q9Y366 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.21■□□□□ 0.83
IFT52Q9Y366 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFT52Q9Y366 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.21■□□□□ 0.83
IFT52Q9Y366 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFT52Q9Y366 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.21■□□□□ 0.83
IFT52Q9Y366 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFT52Q9Y366 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IFT52Q9Y366 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
IFT52Q9Y366 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.2■□□□□ 0.82
IFT52Q9Y366 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
IFT52Q9Y366 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT52Q9Y366 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
IFT52Q9Y366 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.2■□□□□ 0.82
IFT52Q9Y366 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT52Q9Y366 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT52Q9Y366 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT52Q9Y366 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IFT52Q9Y366 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT52Q9Y366 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
IFT52Q9Y366 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.2■□□□□ 0.82
IFT52Q9Y366 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IFT52Q9Y366 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IFT52Q9Y366 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.19■□□□□ 0.82
IFT52Q9Y366 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IFT52Q9Y366 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
IFT52Q9Y366 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT52Q9Y366 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.19■□□□□ 0.82
IFT52Q9Y366 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.19■□□□□ 0.82
IFT52Q9Y366 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT52Q9Y366 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.19■□□□□ 0.82
IFT52Q9Y366 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IFT52Q9Y366 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT52Q9Y366 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.18■□□□□ 0.82
IFT52Q9Y366 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT52Q9Y366 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT52Q9Y366 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT52Q9Y366 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.18■□□□□ 0.82
IFT52Q9Y366 PKD1P6-201ENST00000343738 4769 ntBASIC20.18■□□□□ 0.82
IFT52Q9Y366 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.18■□□□□ 0.82
IFT52Q9Y366 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IFT52Q9Y366 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IFT52Q9Y366 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.18■□□□□ 0.82
IFT52Q9Y366 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IFT52Q9Y366 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IFT52Q9Y366 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.18■□□□□ 0.82
IFT52Q9Y366 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IFT52Q9Y366 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IFT52Q9Y366 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IFT52Q9Y366 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT52Q9Y366 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
IFT52Q9Y366 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
IFT52Q9Y366 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.17■□□□□ 0.82
IFT52Q9Y366 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
IFT52Q9Y366 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
IFT52Q9Y366 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
IFT52Q9Y366 AC092171.4-201ENST00000609130 632 ntBASIC20.17■□□□□ 0.82
IFT52Q9Y366 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.17■□□□□ 0.82
IFT52Q9Y366 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT52Q9Y366 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.17■□□□□ 0.82
IFT52Q9Y366 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
IFT52Q9Y366 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT52Q9Y366 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.17■□□□□ 0.82
IFT52Q9Y366 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT52Q9Y366 AC133637.1-201ENST00000624115 1537 ntBASIC20.17■□□□□ 0.82
IFT52Q9Y366 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IFT52Q9Y366 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.17■□□□□ 0.82
IFT52Q9Y366 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT52Q9Y366 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
IFT52Q9Y366 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IFT52Q9Y366 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.16■□□□□ 0.82
IFT52Q9Y366 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT52Q9Y366 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT52Q9Y366 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT52Q9Y366 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.16■□□□□ 0.82
IFT52Q9Y366 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.16■□□□□ 0.82
IFT52Q9Y366 pRNA.6-201ENST00000610482 90 ntBASIC20.16■□□□□ 0.82
IFT52Q9Y366 pRNA.5-201ENST00000612139 90 ntBASIC20.16■□□□□ 0.82
IFT52Q9Y366 pRNA.11-201ENST00000618423 90 ntBASIC20.16■□□□□ 0.82
IFT52Q9Y366 pRNA.13-201ENST00000619112 90 ntBASIC20.16■□□□□ 0.82
IFT52Q9Y366 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT52Q9Y366 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IFT52Q9Y366 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT52Q9Y366 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT52Q9Y366 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
IFT52Q9Y366 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT52Q9Y366 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IFT52Q9Y366 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms