Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
COPS3Q9UNS2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.28■□□□□ 0.68
COPS3Q9UNS2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPS3Q9UNS2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.28■□□□□ 0.68
COPS3Q9UNS2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPS3Q9UNS2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPS3Q9UNS2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.28■□□□□ 0.68
COPS3Q9UNS2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPS3Q9UNS2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COPS3Q9UNS2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COPS3Q9UNS2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COPS3Q9UNS2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COPS3Q9UNS2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
COPS3Q9UNS2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COPS3Q9UNS2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.27■□□□□ 0.68
COPS3Q9UNS2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.27■□□□□ 0.68
COPS3Q9UNS2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COPS3Q9UNS2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COPS3Q9UNS2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
COPS3Q9UNS2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
COPS3Q9UNS2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COPS3Q9UNS2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COPS3Q9UNS2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPS3Q9UNS2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPS3Q9UNS2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPS3Q9UNS2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.26■□□□□ 0.67
COPS3Q9UNS2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPS3Q9UNS2 AC010997.5-201ENST00000609182 354 ntBASIC19.26■□□□□ 0.67
COPS3Q9UNS2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
COPS3Q9UNS2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPS3Q9UNS2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COPS3Q9UNS2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COPS3Q9UNS2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 TSPY9P-201ENST00000440215 945 ntBASIC19.25■□□□□ 0.67
COPS3Q9UNS2 TSPY11P-201ENST00000442607 1045 ntBASIC19.25■□□□□ 0.67
COPS3Q9UNS2 AC239859.2-201ENST00000444165 318 ntBASIC19.25■□□□□ 0.67
COPS3Q9UNS2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COPS3Q9UNS2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.24■□□□□ 0.67
COPS3Q9UNS2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPS3Q9UNS2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPS3Q9UNS2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPS3Q9UNS2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPS3Q9UNS2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COPS3Q9UNS2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.24■□□□□ 0.67
COPS3Q9UNS2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COPS3Q9UNS2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
COPS3Q9UNS2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
COPS3Q9UNS2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
COPS3Q9UNS2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.24■□□□□ 0.67
COPS3Q9UNS2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.23■□□□□ 0.67
COPS3Q9UNS2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
COPS3Q9UNS2 AC005229.4-201ENST00000610085 2198 ntBASIC19.23■□□□□ 0.67
COPS3Q9UNS2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS3Q9UNS2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS3Q9UNS2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
COPS3Q9UNS2 RARRES2P1-201ENST00000474487 481 ntBASIC19.23■□□□□ 0.67
COPS3Q9UNS2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.23■□□□□ 0.67
COPS3Q9UNS2 AL499627.2-201ENST00000606283 725 ntBASIC19.23■□□□□ 0.67
COPS3Q9UNS2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.23■□□□□ 0.67
COPS3Q9UNS2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS3Q9UNS2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS3Q9UNS2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS3Q9UNS2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
COPS3Q9UNS2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS3Q9UNS2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COPS3Q9UNS2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
COPS3Q9UNS2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.22■□□□□ 0.67
COPS3Q9UNS2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS3Q9UNS2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS3Q9UNS2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
COPS3Q9UNS2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
COPS3Q9UNS2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS3Q9UNS2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS3Q9UNS2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS3Q9UNS2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS3Q9UNS2 AC244015.2-201ENST00000616358 1861 ntBASIC19.22■□□□□ 0.67
COPS3Q9UNS2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
COPS3Q9UNS2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
COPS3Q9UNS2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms