Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHGB4Q9UN71 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHGB4Q9UN71 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PCDHGB4Q9UN71 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
PCDHGB4Q9UN71 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHGB4Q9UN71 RNF165-205ENST00000588679 2904 ntBASIC20.91■□□□□ 0.94
PCDHGB4Q9UN71 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGB4Q9UN71 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGB4Q9UN71 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGB4Q9UN71 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGB4Q9UN71 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGB4Q9UN71 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHGB4Q9UN71 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGB4Q9UN71 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGB4Q9UN71 AC009086.3-201ENST00000623486 1008 ntBASIC20.91■□□□□ 0.94
PCDHGB4Q9UN71 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHGB4Q9UN71 AC092667.1-201ENST00000434301 2586 ntBASIC20.91■□□□□ 0.94
PCDHGB4Q9UN71 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB4Q9UN71 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB4Q9UN71 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB4Q9UN71 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PCDHGB4Q9UN71 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PCDHGB4Q9UN71 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB4Q9UN71 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB4Q9UN71 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
PCDHGB4Q9UN71 AC239859.2-201ENST00000444165 318 ntBASIC20.9■□□□□ 0.94
PCDHGB4Q9UN71 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB4Q9UN71 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHGB4Q9UN71 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHGB4Q9UN71 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHGB4Q9UN71 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHGB4Q9UN71 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHGB4Q9UN71 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
PCDHGB4Q9UN71 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHGB4Q9UN71 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHGB4Q9UN71 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHGB4Q9UN71 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGB4Q9UN71 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGB4Q9UN71 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHGB4Q9UN71 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHGB4Q9UN71 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PCDHGB4Q9UN71 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PCDHGB4Q9UN71 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PCDHGB4Q9UN71 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHGB4Q9UN71 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHGB4Q9UN71 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
PCDHGB4Q9UN71 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGB4Q9UN71 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGB4Q9UN71 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGB4Q9UN71 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGB4Q9UN71 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGB4Q9UN71 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGB4Q9UN71 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGB4Q9UN71 RARRES2P1-201ENST00000474487 481 ntBASIC20.88■□□□□ 0.93
PCDHGB4Q9UN71 DUX4L4-201ENST00000566884 1269 ntBASIC20.88■□□□□ 0.93
PCDHGB4Q9UN71 AC010997.5-201ENST00000609182 354 ntBASIC20.88■□□□□ 0.93
PCDHGB4Q9UN71 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHGB4Q9UN71 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PCDHGB4Q9UN71 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGB4Q9UN71 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHGB4Q9UN71 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PCDHGB4Q9UN71 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PCDHGB4Q9UN71 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB4Q9UN71 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB4Q9UN71 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB4Q9UN71 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB4Q9UN71 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB4Q9UN71 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHGB4Q9UN71 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB4Q9UN71 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB4Q9UN71 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PCDHGB4Q9UN71 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB4Q9UN71 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHGB4Q9UN71 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB4Q9UN71 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHGB4Q9UN71 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB4Q9UN71 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PCDHGB4Q9UN71 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB4Q9UN71 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHGB4Q9UN71 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHGB4Q9UN71 AC092053.2-201ENST00000640557 1818 ntBASIC20.86■□□□□ 0.93
PCDHGB4Q9UN71 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB4Q9UN71 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDHGB4Q9UN71 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB4Q9UN71 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHGB4Q9UN71 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHGB4Q9UN71 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHGB4Q9UN71 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PCDHGB4Q9UN71 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB4Q9UN71 AC005229.4-201ENST00000610085 2198 ntBASIC20.85■□□□□ 0.93
PCDHGB4Q9UN71 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB4Q9UN71 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHGB4Q9UN71 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDHGB4Q9UN71 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDHGB4Q9UN71 TSPY9P-201ENST00000440215 945 ntBASIC20.85■□□□□ 0.93
PCDHGB4Q9UN71 TSPY11P-201ENST00000442607 1045 ntBASIC20.85■□□□□ 0.93
PCDHGB4Q9UN71 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDHGB4Q9UN71 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PCDHGB4Q9UN71 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDHGB4Q9UN71 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms