Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB8Q9UN66 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB8Q9UN66 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB8Q9UN66 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHB8Q9UN66 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB8Q9UN66 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDHB8Q9UN66 AC079140.4-201ENST00000507448 529 ntBASIC23.09■■□□□ 1.29
PCDHB8Q9UN66 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.09■■□□□ 1.29
PCDHB8Q9UN66 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDHB8Q9UN66 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB8Q9UN66 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB8Q9UN66 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDHB8Q9UN66 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHB8Q9UN66 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
PCDHB8Q9UN66 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.08■■□□□ 1.29
PCDHB8Q9UN66 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB8Q9UN66 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB8Q9UN66 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB8Q9UN66 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB8Q9UN66 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB8Q9UN66 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB8Q9UN66 AC004911.1-201ENST00000416316 871 ntBASIC23.08■■□□□ 1.29
PCDHB8Q9UN66 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.08■■□□□ 1.29
PCDHB8Q9UN66 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.08■■□□□ 1.29
PCDHB8Q9UN66 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.08■■□□□ 1.29
PCDHB8Q9UN66 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB8Q9UN66 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB8Q9UN66 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHB8Q9UN66 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
PCDHB8Q9UN66 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
PCDHB8Q9UN66 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHB8Q9UN66 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHB8Q9UN66 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDHB8Q9UN66 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDHB8Q9UN66 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.07■■□□□ 1.28
PCDHB8Q9UN66 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHB8Q9UN66 RARRES2P11-201ENST00000635158 484 ntBASIC23.07■■□□□ 1.28
PCDHB8Q9UN66 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
PCDHB8Q9UN66 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.07■■□□□ 1.28
PCDHB8Q9UN66 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB8Q9UN66 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB8Q9UN66 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB8Q9UN66 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
PCDHB8Q9UN66 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB8Q9UN66 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB8Q9UN66 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDHB8Q9UN66 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDHB8Q9UN66 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDHB8Q9UN66 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
PCDHB8Q9UN66 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB8Q9UN66 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
PCDHB8Q9UN66 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB8Q9UN66 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB8Q9UN66 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB8Q9UN66 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB8Q9UN66 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB8Q9UN66 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB8Q9UN66 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
PCDHB8Q9UN66 OR7E47P-201ENST00000546390 1422 ntBASIC23.05■■□□□ 1.28
PCDHB8Q9UN66 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB8Q9UN66 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB8Q9UN66 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB8Q9UN66 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB8Q9UN66 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB8Q9UN66 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB8Q9UN66 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB8Q9UN66 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHB8Q9UN66 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHB8Q9UN66 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHB8Q9UN66 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.04■■□□□ 1.28
PCDHB8Q9UN66 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB8Q9UN66 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHB8Q9UN66 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB8Q9UN66 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB8Q9UN66 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB8Q9UN66 LINC00526-201ENST00000581067 1875 ntBASIC23.03■■□□□ 1.28
PCDHB8Q9UN66 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHB8Q9UN66 KRT19P1-201ENST00000405746 1186 ntBASIC23.03■■□□□ 1.28
PCDHB8Q9UN66 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHB8Q9UN66 AC137761.2-201ENST00000561729 223 ntBASIC23.03■■□□□ 1.28
PCDHB8Q9UN66 AC145350.3-201ENST00000569033 163 ntBASIC23.03■■□□□ 1.28
PCDHB8Q9UN66 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.03■■□□□ 1.28
PCDHB8Q9UN66 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHB8Q9UN66 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB8Q9UN66 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB8Q9UN66 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB8Q9UN66 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB8Q9UN66 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB8Q9UN66 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB8Q9UN66 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDHB8Q9UN66 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB8Q9UN66 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.02■■□□□ 1.28
PCDHB8Q9UN66 AC006015.1-201ENST00000429970 570 ntBASIC23.02■■□□□ 1.28
PCDHB8Q9UN66 AC090192.1-201ENST00000517740 490 ntBASIC23.02■■□□□ 1.28
PCDHB8Q9UN66 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB8Q9UN66 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.02■■□□□ 1.28
PCDHB8Q9UN66 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDHB8Q9UN66 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHB8Q9UN66 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDHB8Q9UN66 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms