Protein–RNA interactions for Protein: Q9NW08

POLR3B, DNA-directed RNA polymerase III subunit RPC2, humanhuman

Predicted RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3BQ9NW08 AC137761.2-201ENST00000561729 223 ntBASIC22.36■■□□□ 1.17
POLR3BQ9NW08 AC145350.3-201ENST00000569033 163 ntBASIC22.36■■□□□ 1.17
POLR3BQ9NW08 AC004854.2-201ENST00000608450 1441 ntBASIC22.36■■□□□ 1.17
POLR3BQ9NW08 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.36■■□□□ 1.17
POLR3BQ9NW08 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
POLR3BQ9NW08 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 AC073111.5-205ENST00000641717 521 ntBASIC22.35■■□□□ 1.17
POLR3BQ9NW08 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
POLR3BQ9NW08 AP004607.4-201ENST00000530158 1459 ntBASIC22.34■■□□□ 1.17
POLR3BQ9NW08 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.34■■□□□ 1.17
POLR3BQ9NW08 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
POLR3BQ9NW08 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
POLR3BQ9NW08 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
POLR3BQ9NW08 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
POLR3BQ9NW08 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
POLR3BQ9NW08 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.34■■□□□ 1.17
POLR3BQ9NW08 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.34■■□□□ 1.17
POLR3BQ9NW08 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.34■■□□□ 1.17
POLR3BQ9NW08 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
POLR3BQ9NW08 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.34■■□□□ 1.17
POLR3BQ9NW08 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
POLR3BQ9NW08 AC004687.1-201ENST00000579003 1625 ntBASIC22.34■■□□□ 1.17
POLR3BQ9NW08 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
POLR3BQ9NW08 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
POLR3BQ9NW08 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.33■■□□□ 1.17
POLR3BQ9NW08 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
POLR3BQ9NW08 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
POLR3BQ9NW08 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
POLR3BQ9NW08 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.33■■□□□ 1.17
POLR3BQ9NW08 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.33■■□□□ 1.17
POLR3BQ9NW08 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
POLR3BQ9NW08 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
POLR3BQ9NW08 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.16
POLR3BQ9NW08 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
POLR3BQ9NW08 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
POLR3BQ9NW08 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.32■■□□□ 1.16
POLR3BQ9NW08 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.32■■□□□ 1.16
POLR3BQ9NW08 AC016769.1-201ENST00000409132 1010 ntBASIC22.32■■□□□ 1.16
POLR3BQ9NW08 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
POLR3BQ9NW08 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.32■■□□□ 1.16
POLR3BQ9NW08 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
POLR3BQ9NW08 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
POLR3BQ9NW08 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
POLR3BQ9NW08 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
POLR3BQ9NW08 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
POLR3BQ9NW08 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
POLR3BQ9NW08 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.31■■□□□ 1.16
POLR3BQ9NW08 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
POLR3BQ9NW08 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.31■■□□□ 1.16
POLR3BQ9NW08 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.31■■□□□ 1.16
POLR3BQ9NW08 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.31■■□□□ 1.16
POLR3BQ9NW08 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
POLR3BQ9NW08 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
POLR3BQ9NW08 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
POLR3BQ9NW08 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
POLR3BQ9NW08 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
POLR3BQ9NW08 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.3■■□□□ 1.16
POLR3BQ9NW08 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
POLR3BQ9NW08 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.3■■□□□ 1.16
POLR3BQ9NW08 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.3■■□□□ 1.16
POLR3BQ9NW08 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.3■■□□□ 1.16
POLR3BQ9NW08 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
POLR3BQ9NW08 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
POLR3BQ9NW08 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
POLR3BQ9NW08 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.29■■□□□ 1.16
POLR3BQ9NW08 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
POLR3BQ9NW08 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
POLR3BQ9NW08 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.29■■□□□ 1.16
POLR3BQ9NW08 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.29■■□□□ 1.16
POLR3BQ9NW08 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.29■■□□□ 1.16
POLR3BQ9NW08 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.29■■□□□ 1.16
POLR3BQ9NW08 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
POLR3BQ9NW08 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
POLR3BQ9NW08 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.28■■□□□ 1.16
POLR3BQ9NW08 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
POLR3BQ9NW08 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
POLR3BQ9NW08 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
POLR3BQ9NW08 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
POLR3BQ9NW08 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.28■■□□□ 1.16
POLR3BQ9NW08 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.28■■□□□ 1.16
POLR3BQ9NW08 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
POLR3BQ9NW08 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
POLR3BQ9NW08 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms