Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SSU72Q9NP77 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSU72Q9NP77 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SSU72Q9NP77 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSU72Q9NP77 ATP5G2P3-201ENST00000429083 425 ntBASIC21.55■■□□□ 1.04
SSU72Q9NP77 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SSU72Q9NP77 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SSU72Q9NP77 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.55■■□□□ 1.04
SSU72Q9NP77 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSU72Q9NP77 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.55■■□□□ 1.04
SSU72Q9NP77 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
SSU72Q9NP77 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SSU72Q9NP77 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSU72Q9NP77 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SSU72Q9NP77 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSU72Q9NP77 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.54■■□□□ 1.04
SSU72Q9NP77 AC004987.1-201ENST00000428627 508 ntBASIC21.54■■□□□ 1.04
SSU72Q9NP77 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SSU72Q9NP77 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SSU72Q9NP77 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.54■■□□□ 1.04
SSU72Q9NP77 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSU72Q9NP77 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SSU72Q9NP77 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.53■■□□□ 1.04
SSU72Q9NP77 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.53■■□□□ 1.04
SSU72Q9NP77 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSU72Q9NP77 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.53■■□□□ 1.04
SSU72Q9NP77 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.53■■□□□ 1.04
SSU72Q9NP77 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSU72Q9NP77 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSU72Q9NP77 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SSU72Q9NP77 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.53■■□□□ 1.04
SSU72Q9NP77 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SSU72Q9NP77 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSU72Q9NP77 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SSU72Q9NP77 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSU72Q9NP77 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSU72Q9NP77 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.52■■□□□ 1.04
SSU72Q9NP77 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SSU72Q9NP77 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SSU72Q9NP77 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSU72Q9NP77 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSU72Q9NP77 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.52■■□□□ 1.04
SSU72Q9NP77 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.52■■□□□ 1.04
SSU72Q9NP77 ABHD17AP5-201ENST00000580133 923 ntBASIC21.52■■□□□ 1.04
SSU72Q9NP77 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.52■■□□□ 1.04
SSU72Q9NP77 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.52■■□□□ 1.04
SSU72Q9NP77 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSU72Q9NP77 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SSU72Q9NP77 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SSU72Q9NP77 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSU72Q9NP77 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.51■■□□□ 1.03
SSU72Q9NP77 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.51■■□□□ 1.03
SSU72Q9NP77 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.51■■□□□ 1.03
SSU72Q9NP77 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSU72Q9NP77 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSU72Q9NP77 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.51■■□□□ 1.03
SSU72Q9NP77 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SSU72Q9NP77 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.5■■□□□ 1.03
SSU72Q9NP77 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSU72Q9NP77 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SSU72Q9NP77 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SSU72Q9NP77 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SSU72Q9NP77 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SSU72Q9NP77 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SSU72Q9NP77 AC009102.2-201ENST00000606772 1639 ntBASIC21.5■■□□□ 1.03
SSU72Q9NP77 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SSU72Q9NP77 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.5■■□□□ 1.03
SSU72Q9NP77 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSU72Q9NP77 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.49■■□□□ 1.03
SSU72Q9NP77 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.49■■□□□ 1.03
SSU72Q9NP77 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSU72Q9NP77 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.49■■□□□ 1.03
SSU72Q9NP77 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.49■■□□□ 1.03
SSU72Q9NP77 AC104564.3-201ENST00000582367 638 ntBASIC21.49■■□□□ 1.03
SSU72Q9NP77 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.49■■□□□ 1.03
SSU72Q9NP77 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSU72Q9NP77 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SSU72Q9NP77 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSU72Q9NP77 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSU72Q9NP77 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
SSU72Q9NP77 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SSU72Q9NP77 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.49■■□□□ 1.03
SSU72Q9NP77 AL157384.1-201ENST00000445995 2473 ntBASIC21.49■■□□□ 1.03
SSU72Q9NP77 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.49■■□□□ 1.03
SSU72Q9NP77 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.49■■□□□ 1.03
SSU72Q9NP77 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SSU72Q9NP77 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.48■■□□□ 1.03
SSU72Q9NP77 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSU72Q9NP77 PKD1P6-201ENST00000343738 4769 ntBASIC21.48■■□□□ 1.03
SSU72Q9NP77 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSU72Q9NP77 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SSU72Q9NP77 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SSU72Q9NP77 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
SSU72Q9NP77 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.48■■□□□ 1.03
SSU72Q9NP77 AL499627.2-201ENST00000606283 725 ntBASIC21.48■■□□□ 1.03
SSU72Q9NP77 C17orf82-201ENST00000623772 1530 ntBASIC21.48■■□□□ 1.03
SSU72Q9NP77 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSU72Q9NP77 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.48■■□□□ 1.03
SSU72Q9NP77 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SSU72Q9NP77 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms