Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.83■□□□□ 0.93
LRTM1Q9HBL6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.83■□□□□ 0.93
LRTM1Q9HBL6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.83■□□□□ 0.93
LRTM1Q9HBL6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRTM1Q9HBL6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.83■□□□□ 0.92
LRTM1Q9HBL6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
LRTM1Q9HBL6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRTM1Q9HBL6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRTM1Q9HBL6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRTM1Q9HBL6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.82■□□□□ 0.92
LRTM1Q9HBL6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRTM1Q9HBL6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
LRTM1Q9HBL6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRTM1Q9HBL6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
LRTM1Q9HBL6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRTM1Q9HBL6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRTM1Q9HBL6 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.81■□□□□ 0.92
LRTM1Q9HBL6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRTM1Q9HBL6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRTM1Q9HBL6 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.81■□□□□ 0.92
LRTM1Q9HBL6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.81■□□□□ 0.92
LRTM1Q9HBL6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.81■□□□□ 0.92
LRTM1Q9HBL6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRTM1Q9HBL6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRTM1Q9HBL6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.81■□□□□ 0.92
LRTM1Q9HBL6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRTM1Q9HBL6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRTM1Q9HBL6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
LRTM1Q9HBL6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRTM1Q9HBL6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRTM1Q9HBL6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRTM1Q9HBL6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRTM1Q9HBL6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LRTM1Q9HBL6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRTM1Q9HBL6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.8■□□□□ 0.92
LRTM1Q9HBL6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRTM1Q9HBL6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
LRTM1Q9HBL6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRTM1Q9HBL6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LRTM1Q9HBL6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.8■□□□□ 0.92
LRTM1Q9HBL6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRTM1Q9HBL6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
LRTM1Q9HBL6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.79■□□□□ 0.92
LRTM1Q9HBL6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRTM1Q9HBL6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRTM1Q9HBL6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRTM1Q9HBL6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRTM1Q9HBL6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRTM1Q9HBL6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.79■□□□□ 0.92
LRTM1Q9HBL6 AC079089.2-201ENST00000531211 1277 ntBASIC20.79■□□□□ 0.92
LRTM1Q9HBL6 MIR3181-201ENST00000578512 73 ntBASIC20.79■□□□□ 0.92
LRTM1Q9HBL6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRTM1Q9HBL6 AL137060.1-201ENST00000618151 2648 ntBASIC20.79■□□□□ 0.92
LRTM1Q9HBL6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRTM1Q9HBL6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRTM1Q9HBL6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRTM1Q9HBL6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.79■□□□□ 0.92
LRTM1Q9HBL6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.78■□□□□ 0.92
LRTM1Q9HBL6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRTM1Q9HBL6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRTM1Q9HBL6 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRTM1Q9HBL6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRTM1Q9HBL6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.78■□□□□ 0.92
LRTM1Q9HBL6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.78■□□□□ 0.92
LRTM1Q9HBL6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRTM1Q9HBL6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
LRTM1Q9HBL6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRTM1Q9HBL6 SRD5A1P1-201ENST00000442297 786 ntBASIC20.78■□□□□ 0.92
LRTM1Q9HBL6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRTM1Q9HBL6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.78■□□□□ 0.92
LRTM1Q9HBL6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
LRTM1Q9HBL6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.78■□□□□ 0.92
LRTM1Q9HBL6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRTM1Q9HBL6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
LRTM1Q9HBL6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
LRTM1Q9HBL6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRTM1Q9HBL6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LRTM1Q9HBL6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRTM1Q9HBL6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRTM1Q9HBL6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRTM1Q9HBL6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LRTM1Q9HBL6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.77■□□□□ 0.92
LRTM1Q9HBL6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.77■□□□□ 0.92
LRTM1Q9HBL6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
LRTM1Q9HBL6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRTM1Q9HBL6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.77■□□□□ 0.92
LRTM1Q9HBL6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRTM1Q9HBL6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
LRTM1Q9HBL6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.77■□□□□ 0.91
LRTM1Q9HBL6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRTM1Q9HBL6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRTM1Q9HBL6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRTM1Q9HBL6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRTM1Q9HBL6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
LRTM1Q9HBL6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.76■□□□□ 0.91
LRTM1Q9HBL6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
LRTM1Q9HBL6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRTM1Q9HBL6 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.76■□□□□ 0.91
LRTM1Q9HBL6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.76■□□□□ 0.91
LRTM1Q9HBL6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms