Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.78■□□□□ 0.92
BRF2Q9HAW0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.77■□□□□ 0.92
BRF2Q9HAW0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
BRF2Q9HAW0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.77■□□□□ 0.92
BRF2Q9HAW0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BRF2Q9HAW0 AC010141.3-201ENST00000456659 717 ntBASIC20.77■□□□□ 0.92
BRF2Q9HAW0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.77■□□□□ 0.92
BRF2Q9HAW0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.77■□□□□ 0.92
BRF2Q9HAW0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
BRF2Q9HAW0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
BRF2Q9HAW0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRF2Q9HAW0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRF2Q9HAW0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRF2Q9HAW0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.76■□□□□ 0.91
BRF2Q9HAW0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.76■□□□□ 0.91
BRF2Q9HAW0 AC010525.1-201ENST00000585559 441 ntBASIC20.76■□□□□ 0.91
BRF2Q9HAW0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BRF2Q9HAW0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BRF2Q9HAW0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
BRF2Q9HAW0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRF2Q9HAW0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.75■□□□□ 0.91
BRF2Q9HAW0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRF2Q9HAW0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRF2Q9HAW0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRF2Q9HAW0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRF2Q9HAW0 AL136116.3-201ENST00000402907 1138 ntBASIC20.75■□□□□ 0.91
BRF2Q9HAW0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRF2Q9HAW0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRF2Q9HAW0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRF2Q9HAW0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRF2Q9HAW0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRF2Q9HAW0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRF2Q9HAW0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRF2Q9HAW0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
BRF2Q9HAW0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
BRF2Q9HAW0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRF2Q9HAW0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRF2Q9HAW0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRF2Q9HAW0 OR7E47P-201ENST00000546390 1422 ntBASIC20.74■□□□□ 0.91
BRF2Q9HAW0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRF2Q9HAW0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.74■□□□□ 0.91
BRF2Q9HAW0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRF2Q9HAW0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BRF2Q9HAW0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 AP005435.1-201ENST00000529293 1178 ntBASIC20.73■□□□□ 0.91
BRF2Q9HAW0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 FAM99A-202ENST00000538190 1989 ntBASIC20.73■□□□□ 0.91
BRF2Q9HAW0 CLDN5-201ENST00000403084 2357 ntBASIC20.73■□□□□ 0.91
BRF2Q9HAW0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 FBXW4P1-201ENST00000426721 2239 ntBASIC20.73■□□□□ 0.91
BRF2Q9HAW0 OXCT2P1-201ENST00000447263 1535 ntBASIC20.73■□□□□ 0.91
BRF2Q9HAW0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
BRF2Q9HAW0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRF2Q9HAW0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.72■□□□□ 0.91
BRF2Q9HAW0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRF2Q9HAW0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRF2Q9HAW0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
BRF2Q9HAW0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
BRF2Q9HAW0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.72■□□□□ 0.91
BRF2Q9HAW0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
BRF2Q9HAW0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.72■□□□□ 0.91
BRF2Q9HAW0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRF2Q9HAW0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.71■□□□□ 0.91
BRF2Q9HAW0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRF2Q9HAW0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRF2Q9HAW0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
BRF2Q9HAW0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRF2Q9HAW0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRF2Q9HAW0 AC010542.4-201ENST00000563151 1910 ntBASIC20.71■□□□□ 0.91
BRF2Q9HAW0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRF2Q9HAW0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.71■□□□□ 0.91
BRF2Q9HAW0 SLC47A1P1-202ENST00000449666 945 ntBASIC20.71■□□□□ 0.91
BRF2Q9HAW0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRF2Q9HAW0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.71■□□□□ 0.91
BRF2Q9HAW0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.71■□□□□ 0.91
BRF2Q9HAW0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BRF2Q9HAW0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.71■□□□□ 0.91
BRF2Q9HAW0 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.71■□□□□ 0.91
BRF2Q9HAW0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
BRF2Q9HAW0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.71■□□□□ 0.91
BRF2Q9HAW0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
BRF2Q9HAW0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRF2Q9HAW0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRF2Q9HAW0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms