Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC012676.1-201ENST00000574705 1949 ntBASIC25.63■■□□□ 1.69
RNF41Q9H4P4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF41Q9H4P4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF41Q9H4P4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.62■■□□□ 1.69
RNF41Q9H4P4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF41Q9H4P4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF41Q9H4P4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.62■■□□□ 1.69
RNF41Q9H4P4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC25.62■■□□□ 1.69
RNF41Q9H4P4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF41Q9H4P4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF41Q9H4P4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 AC027612.3-201ENST00000413684 1047 ntBASIC25.61■■□□□ 1.69
RNF41Q9H4P4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RNF41Q9H4P4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF41Q9H4P4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RNF41Q9H4P4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
RNF41Q9H4P4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF41Q9H4P4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF41Q9H4P4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.6■■□□□ 1.69
RNF41Q9H4P4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RNF41Q9H4P4 MIR6084-201ENST00000622012 110 ntBASIC25.6■■□□□ 1.69
RNF41Q9H4P4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF41Q9H4P4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RNF41Q9H4P4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.6■■□□□ 1.69
RNF41Q9H4P4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF41Q9H4P4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RNF41Q9H4P4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.59■■□□□ 1.69
RNF41Q9H4P4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RNF41Q9H4P4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.59■■□□□ 1.69
RNF41Q9H4P4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.59■■□□□ 1.69
RNF41Q9H4P4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.59■■□□□ 1.69
RNF41Q9H4P4 AC233723.2-201ENST00000623798 2106 ntBASIC25.59■■□□□ 1.69
RNF41Q9H4P4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RNF41Q9H4P4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RNF41Q9H4P4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
RNF41Q9H4P4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
RNF41Q9H4P4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
RNF41Q9H4P4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.58■■□□□ 1.69
RNF41Q9H4P4 BX005040.4-201ENST00000637145 1518 ntBASIC25.58■■□□□ 1.69
RNF41Q9H4P4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RNF41Q9H4P4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC25.58■■□□□ 1.69
RNF41Q9H4P4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
RNF41Q9H4P4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RNF41Q9H4P4 AC080038.3-201ENST00000623346 1952 ntBASIC25.57■■□□□ 1.68
RNF41Q9H4P4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF41Q9H4P4 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.57■■□□□ 1.68
RNF41Q9H4P4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF41Q9H4P4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
RNF41Q9H4P4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF41Q9H4P4 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.56■■□□□ 1.68
RNF41Q9H4P4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC25.56■■□□□ 1.68
RNF41Q9H4P4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC25.56■■□□□ 1.68
RNF41Q9H4P4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.56■■□□□ 1.68
RNF41Q9H4P4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF41Q9H4P4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RNF41Q9H4P4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RNF41Q9H4P4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.55■■□□□ 1.68
RNF41Q9H4P4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF41Q9H4P4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.55■■□□□ 1.68
RNF41Q9H4P4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC25.55■■□□□ 1.68
RNF41Q9H4P4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC25.55■■□□□ 1.68
RNF41Q9H4P4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF41Q9H4P4 YBX1P1-201ENST00000445822 960 ntBASIC25.55■■□□□ 1.68
RNF41Q9H4P4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.55■■□□□ 1.68
RNF41Q9H4P4 AL034346.1-201ENST00000568244 1277 ntBASIC25.55■■□□□ 1.68
RNF41Q9H4P4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC25.54■■□□□ 1.68
RNF41Q9H4P4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
RNF41Q9H4P4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.54■■□□□ 1.68
RNF41Q9H4P4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RNF41Q9H4P4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF41Q9H4P4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.54■■□□□ 1.68
RNF41Q9H4P4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF41Q9H4P4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
RNF41Q9H4P4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
RNF41Q9H4P4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.54■■□□□ 1.68
RNF41Q9H4P4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.54■■□□□ 1.68
RNF41Q9H4P4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.53■■□□□ 1.68
RNF41Q9H4P4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC25.53■■□□□ 1.68
RNF41Q9H4P4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF41Q9H4P4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RNF41Q9H4P4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RNF41Q9H4P4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
RNF41Q9H4P4 AC123595.1-201ENST00000440769 1046 ntBASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms