Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLPBQ9H078 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLPBQ9H078 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLPBQ9H078 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CLPBQ9H078 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLPBQ9H078 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CLPBQ9H078 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLPBQ9H078 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLPBQ9H078 YBX1P1-201ENST00000445822 960 ntBASIC21.74■■□□□ 1.07
CLPBQ9H078 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.74■■□□□ 1.07
CLPBQ9H078 MIR6084-201ENST00000622012 110 ntBASIC21.74■■□□□ 1.07
CLPBQ9H078 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CLPBQ9H078 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CLPBQ9H078 AC087742.1-201ENST00000575880 1738 ntBASIC21.74■■□□□ 1.07
CLPBQ9H078 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLPBQ9H078 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CLPBQ9H078 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLPBQ9H078 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLPBQ9H078 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLPBQ9H078 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.73■■□□□ 1.07
CLPBQ9H078 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLPBQ9H078 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLPBQ9H078 AL358852.1-201ENST00000623174 1268 ntBASIC21.73■■□□□ 1.07
CLPBQ9H078 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLPBQ9H078 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.73■■□□□ 1.07
CLPBQ9H078 AC127496.7-201ENST00000625110 1798 ntBASIC21.73■■□□□ 1.07
CLPBQ9H078 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CLPBQ9H078 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.73■■□□□ 1.07
CLPBQ9H078 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CLPBQ9H078 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLPBQ9H078 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLPBQ9H078 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLPBQ9H078 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CLPBQ9H078 AL117328.2-201ENST00000624617 1940 ntBASIC21.72■■□□□ 1.07
CLPBQ9H078 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CLPBQ9H078 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.72■■□□□ 1.07
CLPBQ9H078 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLPBQ9H078 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.72■■□□□ 1.07
CLPBQ9H078 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.72■■□□□ 1.07
CLPBQ9H078 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.72■■□□□ 1.07
CLPBQ9H078 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.72■■□□□ 1.07
CLPBQ9H078 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLPBQ9H078 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLPBQ9H078 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLPBQ9H078 GUSBP5-202ENST00000510805 1989 ntBASIC21.72■■□□□ 1.07
CLPBQ9H078 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLPBQ9H078 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CLPBQ9H078 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLPBQ9H078 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLPBQ9H078 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLPBQ9H078 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLPBQ9H078 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CLPBQ9H078 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLPBQ9H078 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CLPBQ9H078 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.71■■□□□ 1.07
CLPBQ9H078 AC027612.3-201ENST00000413684 1047 ntBASIC21.71■■□□□ 1.07
CLPBQ9H078 AC034268.1-201ENST00000441047 882 ntBASIC21.71■■□□□ 1.07
CLPBQ9H078 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.71■■□□□ 1.07
CLPBQ9H078 AC012414.1-201ENST00000556676 535 ntBASIC21.71■■□□□ 1.07
CLPBQ9H078 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CLPBQ9H078 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CLPBQ9H078 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.71■■□□□ 1.07
CLPBQ9H078 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CLPBQ9H078 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.71■■□□□ 1.07
CLPBQ9H078 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLPBQ9H078 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLPBQ9H078 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLPBQ9H078 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLPBQ9H078 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLPBQ9H078 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CLPBQ9H078 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.7■■□□□ 1.06
CLPBQ9H078 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.7■■□□□ 1.06
CLPBQ9H078 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.7■■□□□ 1.06
CLPBQ9H078 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLPBQ9H078 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.7■■□□□ 1.06
CLPBQ9H078 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.7■■□□□ 1.06
CLPBQ9H078 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.7■■□□□ 1.06
CLPBQ9H078 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLPBQ9H078 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
CLPBQ9H078 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLPBQ9H078 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLPBQ9H078 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CLPBQ9H078 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLPBQ9H078 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CLPBQ9H078 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLPBQ9H078 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLPBQ9H078 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CLPBQ9H078 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLPBQ9H078 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLPBQ9H078 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLPBQ9H078 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.69■■□□□ 1.06
CLPBQ9H078 AP005435.1-201ENST00000529293 1178 ntBASIC21.69■■□□□ 1.06
CLPBQ9H078 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLPBQ9H078 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CLPBQ9H078 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CLPBQ9H078 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.69■■□□□ 1.06
CLPBQ9H078 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLPBQ9H078 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLPBQ9H078 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CLPBQ9H078 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms