Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.45■■□□□ 1.82
RPAP1Q9BWH6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
RPAP1Q9BWH6 EP400NL-214ENST00000641289 2402 ntBASIC26.44■■□□□ 1.82
RPAP1Q9BWH6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.44■■□□□ 1.82
RPAP1Q9BWH6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
RPAP1Q9BWH6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
RPAP1Q9BWH6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.44■■□□□ 1.82
RPAP1Q9BWH6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RPAP1Q9BWH6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.44■■□□□ 1.82
RPAP1Q9BWH6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC26.44■■□□□ 1.82
RPAP1Q9BWH6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
RPAP1Q9BWH6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RPAP1Q9BWH6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RPAP1Q9BWH6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RPAP1Q9BWH6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC26.43■■□□□ 1.82
RPAP1Q9BWH6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.43■■□□□ 1.82
RPAP1Q9BWH6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
RPAP1Q9BWH6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RPAP1Q9BWH6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
RPAP1Q9BWH6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RPAP1Q9BWH6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
RPAP1Q9BWH6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.43■■□□□ 1.82
RPAP1Q9BWH6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.43■■□□□ 1.82
RPAP1Q9BWH6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
RPAP1Q9BWH6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RPAP1Q9BWH6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.42■■□□□ 1.82
RPAP1Q9BWH6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
RPAP1Q9BWH6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.42■■□□□ 1.82
RPAP1Q9BWH6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RPAP1Q9BWH6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RPAP1Q9BWH6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC26.42■■□□□ 1.82
RPAP1Q9BWH6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.42■■□□□ 1.82
RPAP1Q9BWH6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.42■■□□□ 1.82
RPAP1Q9BWH6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RPAP1Q9BWH6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC26.42■■□□□ 1.82
RPAP1Q9BWH6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RPAP1Q9BWH6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC26.41■■□□□ 1.82
RPAP1Q9BWH6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
RPAP1Q9BWH6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC26.41■■□□□ 1.82
RPAP1Q9BWH6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RPAP1Q9BWH6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
RPAP1Q9BWH6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.41■■□□□ 1.82
RPAP1Q9BWH6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
RPAP1Q9BWH6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
RPAP1Q9BWH6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RPAP1Q9BWH6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RPAP1Q9BWH6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
RPAP1Q9BWH6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.41■■□□□ 1.82
RPAP1Q9BWH6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
RPAP1Q9BWH6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RPAP1Q9BWH6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.4■■□□□ 1.82
RPAP1Q9BWH6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
RPAP1Q9BWH6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
RPAP1Q9BWH6 NTF6G-201ENST00000591094 616 ntBASIC26.4■■□□□ 1.82
RPAP1Q9BWH6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
RPAP1Q9BWH6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RPAP1Q9BWH6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RPAP1Q9BWH6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RPAP1Q9BWH6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC26.39■■□□□ 1.82
RPAP1Q9BWH6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
RPAP1Q9BWH6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RPAP1Q9BWH6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
RPAP1Q9BWH6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
RPAP1Q9BWH6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
RPAP1Q9BWH6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RPAP1Q9BWH6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
RPAP1Q9BWH6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
RPAP1Q9BWH6 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.39■■□□□ 1.82
RPAP1Q9BWH6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC26.39■■□□□ 1.82
RPAP1Q9BWH6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC26.39■■□□□ 1.82
RPAP1Q9BWH6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.39■■□□□ 1.82
RPAP1Q9BWH6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RPAP1Q9BWH6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RPAP1Q9BWH6 CLDN5-201ENST00000403084 2357 ntBASIC26.39■■□□□ 1.81
RPAP1Q9BWH6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC26.39■■□□□ 1.81
RPAP1Q9BWH6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.39■■□□□ 1.81
RPAP1Q9BWH6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.39■■□□□ 1.81
RPAP1Q9BWH6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
RPAP1Q9BWH6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RPAP1Q9BWH6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
RPAP1Q9BWH6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
RPAP1Q9BWH6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RPAP1Q9BWH6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.38■■□□□ 1.81
RPAP1Q9BWH6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.38■■□□□ 1.81
RPAP1Q9BWH6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RPAP1Q9BWH6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPAP1Q9BWH6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC26.37■■□□□ 1.81
RPAP1Q9BWH6 AC004911.1-201ENST00000416316 871 ntBASIC26.37■■□□□ 1.81
RPAP1Q9BWH6 AC105233.4-201ENST00000642045 216 ntBASIC26.37■■□□□ 1.81
RPAP1Q9BWH6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RPAP1Q9BWH6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPAP1Q9BWH6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPAP1Q9BWH6 AC004687.1-201ENST00000579003 1625 ntBASIC26.37■■□□□ 1.81
RPAP1Q9BWH6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPAP1Q9BWH6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC26.36■■□□□ 1.81
RPAP1Q9BWH6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
RPAP1Q9BWH6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.36■■□□□ 1.81
RPAP1Q9BWH6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC26.36■■□□□ 1.81
RPAP1Q9BWH6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RPAP1Q9BWH6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms