Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.67■□□□□ 0.9
THUMPD3Q9BV44 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
THUMPD3Q9BV44 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
THUMPD3Q9BV44 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
THUMPD3Q9BV44 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.66■□□□□ 0.9
THUMPD3Q9BV44 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
THUMPD3Q9BV44 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
THUMPD3Q9BV44 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
THUMPD3Q9BV44 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
THUMPD3Q9BV44 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.66■□□□□ 0.9
THUMPD3Q9BV44 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
THUMPD3Q9BV44 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
THUMPD3Q9BV44 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
THUMPD3Q9BV44 AL024507.2-201ENST00000606070 2574 ntBASIC20.65■□□□□ 0.9
THUMPD3Q9BV44 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
THUMPD3Q9BV44 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
THUMPD3Q9BV44 AC004687.1-201ENST00000579003 1625 ntBASIC20.65■□□□□ 0.9
THUMPD3Q9BV44 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.65■□□□□ 0.9
THUMPD3Q9BV44 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
THUMPD3Q9BV44 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
THUMPD3Q9BV44 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.65■□□□□ 0.9
THUMPD3Q9BV44 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
THUMPD3Q9BV44 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
THUMPD3Q9BV44 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
THUMPD3Q9BV44 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.65■□□□□ 0.9
THUMPD3Q9BV44 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
THUMPD3Q9BV44 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
THUMPD3Q9BV44 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
THUMPD3Q9BV44 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.64■□□□□ 0.9
THUMPD3Q9BV44 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.64■□□□□ 0.9
THUMPD3Q9BV44 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.64■□□□□ 0.9
THUMPD3Q9BV44 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
THUMPD3Q9BV44 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
THUMPD3Q9BV44 UNC93B8-201ENST00000511903 705 ntBASIC20.64■□□□□ 0.89
THUMPD3Q9BV44 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
THUMPD3Q9BV44 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
THUMPD3Q9BV44 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
THUMPD3Q9BV44 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
THUMPD3Q9BV44 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
THUMPD3Q9BV44 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.63■□□□□ 0.89
THUMPD3Q9BV44 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
THUMPD3Q9BV44 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.63■□□□□ 0.89
THUMPD3Q9BV44 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
THUMPD3Q9BV44 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.63■□□□□ 0.89
THUMPD3Q9BV44 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.63■□□□□ 0.89
THUMPD3Q9BV44 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
THUMPD3Q9BV44 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
THUMPD3Q9BV44 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
THUMPD3Q9BV44 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
THUMPD3Q9BV44 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
THUMPD3Q9BV44 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
THUMPD3Q9BV44 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
THUMPD3Q9BV44 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
THUMPD3Q9BV44 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.61■□□□□ 0.89
THUMPD3Q9BV44 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.61■□□□□ 0.89
THUMPD3Q9BV44 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.61■□□□□ 0.89
THUMPD3Q9BV44 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
THUMPD3Q9BV44 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
THUMPD3Q9BV44 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
THUMPD3Q9BV44 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.61■□□□□ 0.89
THUMPD3Q9BV44 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
THUMPD3Q9BV44 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
THUMPD3Q9BV44 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
THUMPD3Q9BV44 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.6■□□□□ 0.89
THUMPD3Q9BV44 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.6■□□□□ 0.89
THUMPD3Q9BV44 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
THUMPD3Q9BV44 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.6■□□□□ 0.89
THUMPD3Q9BV44 GUSBP5-201ENST00000418136 578 ntBASIC20.6■□□□□ 0.89
THUMPD3Q9BV44 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
THUMPD3Q9BV44 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.6■□□□□ 0.89
THUMPD3Q9BV44 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.6■□□□□ 0.89
THUMPD3Q9BV44 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.6■□□□□ 0.89
THUMPD3Q9BV44 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
THUMPD3Q9BV44 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
THUMPD3Q9BV44 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
THUMPD3Q9BV44 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
THUMPD3Q9BV44 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.6■□□□□ 0.89
THUMPD3Q9BV44 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
THUMPD3Q9BV44 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
THUMPD3Q9BV44 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
THUMPD3Q9BV44 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
THUMPD3Q9BV44 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms