Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TM9SF2Q99805 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF2Q99805 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF2Q99805 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF2Q99805 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF2Q99805 SLC25A24-204ENST00000569674 2357 ntBASIC19.98■□□□□ 0.79
TM9SF2Q99805 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF2Q99805 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF2Q99805 AC105265.2-201ENST00000467189 838 ntBASIC19.98■□□□□ 0.79
TM9SF2Q99805 AC008764.7-201ENST00000593779 1081 ntBASIC19.98■□□□□ 0.79
TM9SF2Q99805 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.98■□□□□ 0.79
TM9SF2Q99805 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.98■□□□□ 0.79
TM9SF2Q99805 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF2Q99805 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF2Q99805 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF2Q99805 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF2Q99805 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF2Q99805 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM9SF2Q99805 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.97■□□□□ 0.79
TM9SF2Q99805 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TM9SF2Q99805 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TM9SF2Q99805 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.97■□□□□ 0.79
TM9SF2Q99805 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF2Q99805 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF2Q99805 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF2Q99805 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF2Q99805 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF2Q99805 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF2Q99805 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF2Q99805 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF2Q99805 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF2Q99805 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.97■□□□□ 0.79
TM9SF2Q99805 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TM9SF2Q99805 CA15P2-201ENST00000611168 834 ntBASIC19.97■□□□□ 0.79
TM9SF2Q99805 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF2Q99805 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TM9SF2Q99805 AL121603.2-201ENST00000557373 2117 ntBASIC19.97■□□□□ 0.79
TM9SF2Q99805 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF2Q99805 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM9SF2Q99805 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.97■□□□□ 0.79
TM9SF2Q99805 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF2Q99805 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF2Q99805 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF2Q99805 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF2Q99805 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF2Q99805 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF2Q99805 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF2Q99805 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.96■□□□□ 0.79
TM9SF2Q99805 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF2Q99805 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.96■□□□□ 0.79
TM9SF2Q99805 AC233992.3-201ENST00000607491 485 ntBASIC19.96■□□□□ 0.79
TM9SF2Q99805 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF2Q99805 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF2Q99805 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.96■□□□□ 0.79
TM9SF2Q99805 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF2Q99805 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TM9SF2Q99805 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.79
TM9SF2Q99805 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM9SF2Q99805 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM9SF2Q99805 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM9SF2Q99805 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TM9SF2Q99805 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TM9SF2Q99805 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TM9SF2Q99805 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
TM9SF2Q99805 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
TM9SF2Q99805 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.95■□□□□ 0.78
TM9SF2Q99805 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
TM9SF2Q99805 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.95■□□□□ 0.78
TM9SF2Q99805 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.95■□□□□ 0.78
TM9SF2Q99805 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.95■□□□□ 0.78
TM9SF2Q99805 AC099791.1-201ENST00000416440 715 ntBASIC19.95■□□□□ 0.78
TM9SF2Q99805 BX842568.3-201ENST00000418104 571 ntBASIC19.95■□□□□ 0.78
TM9SF2Q99805 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.95■□□□□ 0.78
TM9SF2Q99805 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.95■□□□□ 0.78
TM9SF2Q99805 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.95■□□□□ 0.78
TM9SF2Q99805 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.95■□□□□ 0.78
TM9SF2Q99805 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM9SF2Q99805 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.95■□□□□ 0.78
TM9SF2Q99805 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TM9SF2Q99805 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.95■□□□□ 0.78
TM9SF2Q99805 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TM9SF2Q99805 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM9SF2Q99805 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.94■□□□□ 0.78
TM9SF2Q99805 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TM9SF2Q99805 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM9SF2Q99805 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.94■□□□□ 0.78
TM9SF2Q99805 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TM9SF2Q99805 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.94■□□□□ 0.78
TM9SF2Q99805 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
TM9SF2Q99805 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
TM9SF2Q99805 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM9SF2Q99805 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM9SF2Q99805 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM9SF2Q99805 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM9SF2Q99805 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.94■□□□□ 0.78
TM9SF2Q99805 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TM9SF2Q99805 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TM9SF2Q99805 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.94■□□□□ 0.78
TM9SF2Q99805 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TM9SF2Q99805 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms