Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
NR1H4Q96RI1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NR1H4Q96RI1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NR1H4Q96RI1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NR1H4Q96RI1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.39■□□□□ 0.85
NR1H4Q96RI1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NR1H4Q96RI1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
NR1H4Q96RI1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.38■□□□□ 0.85
NR1H4Q96RI1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
NR1H4Q96RI1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NR1H4Q96RI1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
NR1H4Q96RI1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
NR1H4Q96RI1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.38■□□□□ 0.85
NR1H4Q96RI1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
NR1H4Q96RI1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.38■□□□□ 0.85
NR1H4Q96RI1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NR1H4Q96RI1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.38■□□□□ 0.85
NR1H4Q96RI1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NR1H4Q96RI1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NR1H4Q96RI1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
NR1H4Q96RI1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.38■□□□□ 0.85
NR1H4Q96RI1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NR1H4Q96RI1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.37■□□□□ 0.85
NR1H4Q96RI1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NR1H4Q96RI1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.37■□□□□ 0.85
NR1H4Q96RI1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.37■□□□□ 0.85
NR1H4Q96RI1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.37■□□□□ 0.85
NR1H4Q96RI1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
NR1H4Q96RI1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NR1H4Q96RI1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NR1H4Q96RI1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NR1H4Q96RI1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.37■□□□□ 0.85
NR1H4Q96RI1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NR1H4Q96RI1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NR1H4Q96RI1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NR1H4Q96RI1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NR1H4Q96RI1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NR1H4Q96RI1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
NR1H4Q96RI1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NR1H4Q96RI1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.36■□□□□ 0.85
NR1H4Q96RI1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NR1H4Q96RI1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NR1H4Q96RI1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NR1H4Q96RI1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NR1H4Q96RI1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.36■□□□□ 0.85
NR1H4Q96RI1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
NR1H4Q96RI1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NR1H4Q96RI1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NR1H4Q96RI1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NR1H4Q96RI1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.35■□□□□ 0.85
NR1H4Q96RI1 AL022069.1-201ENST00000568025 1636 ntBASIC20.35■□□□□ 0.85
NR1H4Q96RI1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NR1H4Q96RI1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NR1H4Q96RI1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NR1H4Q96RI1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
NR1H4Q96RI1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NR1H4Q96RI1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.35■□□□□ 0.85
NR1H4Q96RI1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NR1H4Q96RI1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NR1H4Q96RI1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
NR1H4Q96RI1 AL353803.4-201ENST00000565882 1934 ntBASIC20.35■□□□□ 0.85
NR1H4Q96RI1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.35■□□□□ 0.85
NR1H4Q96RI1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.34■□□□□ 0.85
NR1H4Q96RI1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NR1H4Q96RI1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NR1H4Q96RI1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
NR1H4Q96RI1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NR1H4Q96RI1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NR1H4Q96RI1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.33■□□□□ 0.85
NR1H4Q96RI1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NR1H4Q96RI1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
NR1H4Q96RI1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
NR1H4Q96RI1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.33■□□□□ 0.85
NR1H4Q96RI1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
NR1H4Q96RI1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.33■□□□□ 0.84
NR1H4Q96RI1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.33■□□□□ 0.84
NR1H4Q96RI1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.33■□□□□ 0.84
NR1H4Q96RI1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
NR1H4Q96RI1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NR1H4Q96RI1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NR1H4Q96RI1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
NR1H4Q96RI1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms