Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNX18Q96RF0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.65■□□□□ 0.74
SNX18Q96RF0 AC092053.2-201ENST00000640557 1818 ntBASIC19.65■□□□□ 0.74
SNX18Q96RF0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SNX18Q96RF0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SNX18Q96RF0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SNX18Q96RF0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SNX18Q96RF0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SNX18Q96RF0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SNX18Q96RF0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SNX18Q96RF0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.64■□□□□ 0.73
SNX18Q96RF0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.64■□□□□ 0.73
SNX18Q96RF0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.64■□□□□ 0.73
SNX18Q96RF0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.64■□□□□ 0.73
SNX18Q96RF0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX18Q96RF0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX18Q96RF0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX18Q96RF0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SNX18Q96RF0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX18Q96RF0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX18Q96RF0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX18Q96RF0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SNX18Q96RF0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNX18Q96RF0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
SNX18Q96RF0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX18Q96RF0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX18Q96RF0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX18Q96RF0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX18Q96RF0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX18Q96RF0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX18Q96RF0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX18Q96RF0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.62■□□□□ 0.73
SNX18Q96RF0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX18Q96RF0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX18Q96RF0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.62■□□□□ 0.73
SNX18Q96RF0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.62■□□□□ 0.73
SNX18Q96RF0 MIR6724-1-201ENST00000616420 92 ntBASIC19.62■□□□□ 0.73
SNX18Q96RF0 MIR6724-2-201ENST00000616483 92 ntBASIC19.62■□□□□ 0.73
SNX18Q96RF0 MIR6724-4-201ENST00000617390 92 ntBASIC19.62■□□□□ 0.73
SNX18Q96RF0 MIR6724-3-201ENST00000622482 92 ntBASIC19.62■□□□□ 0.73
SNX18Q96RF0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX18Q96RF0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SNX18Q96RF0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SNX18Q96RF0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SNX18Q96RF0 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
SNX18Q96RF0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX18Q96RF0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SNX18Q96RF0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX18Q96RF0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX18Q96RF0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX18Q96RF0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX18Q96RF0 LINC01960-201ENST00000563759 1884 ntBASIC19.61■□□□□ 0.73
SNX18Q96RF0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.61■□□□□ 0.73
SNX18Q96RF0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX18Q96RF0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX18Q96RF0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.61■□□□□ 0.73
SNX18Q96RF0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNX18Q96RF0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SNX18Q96RF0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX18Q96RF0 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.6■□□□□ 0.73
SNX18Q96RF0 AL499627.2-201ENST00000606283 725 ntBASIC19.6■□□□□ 0.73
SNX18Q96RF0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.6■□□□□ 0.73
SNX18Q96RF0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SNX18Q96RF0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SNX18Q96RF0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SNX18Q96RF0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX18Q96RF0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX18Q96RF0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNX18Q96RF0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX18Q96RF0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.59■□□□□ 0.73
SNX18Q96RF0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SNX18Q96RF0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.59■□□□□ 0.73
SNX18Q96RF0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX18Q96RF0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX18Q96RF0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX18Q96RF0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX18Q96RF0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.59■□□□□ 0.73
SNX18Q96RF0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.59■□□□□ 0.73
SNX18Q96RF0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SNX18Q96RF0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX18Q96RF0 AC080038.3-201ENST00000623346 1952 ntBASIC19.59■□□□□ 0.73
SNX18Q96RF0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SNX18Q96RF0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX18Q96RF0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.58■□□□□ 0.73
SNX18Q96RF0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX18Q96RF0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX18Q96RF0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX18Q96RF0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SNX18Q96RF0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.58■□□□□ 0.73
SNX18Q96RF0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX18Q96RF0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNX18Q96RF0 CA15P2-201ENST00000611168 834 ntBASIC19.58■□□□□ 0.72
SNX18Q96RF0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.58■□□□□ 0.72
SNX18Q96RF0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SNX18Q96RF0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
SNX18Q96RF0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
SNX18Q96RF0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SNX18Q96RF0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.58■□□□□ 0.72
SNX18Q96RF0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.58■□□□□ 0.72
SNX18Q96RF0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms