Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC46A1Q96NT5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC46A1Q96NT5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC46A1Q96NT5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC46A1Q96NT5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC46A1Q96NT5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC46A1Q96NT5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC46A1Q96NT5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SLC46A1Q96NT5 MIR663A-201ENST00000385250 93 ntBASIC20.8■□□□□ 0.92
SLC46A1Q96NT5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC46A1Q96NT5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC46A1Q96NT5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.8■□□□□ 0.92
SLC46A1Q96NT5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC46A1Q96NT5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SLC46A1Q96NT5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SLC46A1Q96NT5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC46A1Q96NT5 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC46A1Q96NT5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC46A1Q96NT5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC46A1Q96NT5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC46A1Q96NT5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SLC46A1Q96NT5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC46A1Q96NT5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.79■□□□□ 0.92
SLC46A1Q96NT5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC46A1Q96NT5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.79■□□□□ 0.92
SLC46A1Q96NT5 AC079140.4-201ENST00000507448 529 ntBASIC20.79■□□□□ 0.92
SLC46A1Q96NT5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.79■□□□□ 0.92
SLC46A1Q96NT5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC46A1Q96NT5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SLC46A1Q96NT5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC46A1Q96NT5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC46A1Q96NT5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC46A1Q96NT5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC46A1Q96NT5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC46A1Q96NT5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC46A1Q96NT5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SLC46A1Q96NT5 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC46A1Q96NT5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.78■□□□□ 0.92
SLC46A1Q96NT5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC46A1Q96NT5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.78■□□□□ 0.92
SLC46A1Q96NT5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC46A1Q96NT5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SLC46A1Q96NT5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC46A1Q96NT5 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SLC46A1Q96NT5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SLC46A1Q96NT5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC46A1Q96NT5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SLC46A1Q96NT5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SLC46A1Q96NT5 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SLC46A1Q96NT5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC46A1Q96NT5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC46A1Q96NT5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC46A1Q96NT5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC46A1Q96NT5 CD99P1-205ENST00000527459 561 ntBASIC20.77■□□□□ 0.92
SLC46A1Q96NT5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
SLC46A1Q96NT5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC46A1Q96NT5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC46A1Q96NT5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
SLC46A1Q96NT5 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC46A1Q96NT5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC46A1Q96NT5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC46A1Q96NT5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC46A1Q96NT5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SLC46A1Q96NT5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC46A1Q96NT5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC46A1Q96NT5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SLC46A1Q96NT5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC46A1Q96NT5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SLC46A1Q96NT5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC46A1Q96NT5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SLC46A1Q96NT5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC46A1Q96NT5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
SLC46A1Q96NT5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC46A1Q96NT5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SLC46A1Q96NT5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.75■□□□□ 0.91
SLC46A1Q96NT5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC46A1Q96NT5 AC142086.2-201ENST00000569753 217 ntBASIC20.75■□□□□ 0.91
SLC46A1Q96NT5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC46A1Q96NT5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC46A1Q96NT5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC46A1Q96NT5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC46A1Q96NT5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC46A1Q96NT5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 AL353803.4-201ENST00000565882 1934 ntBASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC46A1Q96NT5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms