Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
IFT43Q96FT9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
IFT43Q96FT9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.24■■□□□ 1.15
IFT43Q96FT9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
IFT43Q96FT9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.24■■□□□ 1.15
IFT43Q96FT9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
IFT43Q96FT9 BX842568.3-201ENST00000418104 571 ntBASIC22.24■■□□□ 1.15
IFT43Q96FT9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
IFT43Q96FT9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
IFT43Q96FT9 AC008764.7-201ENST00000593779 1081 ntBASIC22.24■■□□□ 1.15
IFT43Q96FT9 AC233992.3-201ENST00000607491 485 ntBASIC22.24■■□□□ 1.15
IFT43Q96FT9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.24■■□□□ 1.15
IFT43Q96FT9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
IFT43Q96FT9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.23■■□□□ 1.15
IFT43Q96FT9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.23■■□□□ 1.15
IFT43Q96FT9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
IFT43Q96FT9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.23■■□□□ 1.15
IFT43Q96FT9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
IFT43Q96FT9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
IFT43Q96FT9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
IFT43Q96FT9 AC099791.1-201ENST00000416440 715 ntBASIC22.23■■□□□ 1.15
IFT43Q96FT9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.23■■□□□ 1.15
IFT43Q96FT9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.23■■□□□ 1.15
IFT43Q96FT9 MIR6821-201ENST00000617625 74 ntBASIC22.23■■□□□ 1.15
IFT43Q96FT9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
IFT43Q96FT9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.23■■□□□ 1.15
IFT43Q96FT9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.23■■□□□ 1.15
IFT43Q96FT9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
IFT43Q96FT9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
IFT43Q96FT9 ESRRAP2-201ENST00000418437 1549 ntBASIC22.22■■□□□ 1.15
IFT43Q96FT9 LINC01960-201ENST00000563759 1884 ntBASIC22.22■■□□□ 1.15
IFT43Q96FT9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
IFT43Q96FT9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.22■■□□□ 1.15
IFT43Q96FT9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
IFT43Q96FT9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.22■■□□□ 1.15
IFT43Q96FT9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.22■■□□□ 1.15
IFT43Q96FT9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
IFT43Q96FT9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
IFT43Q96FT9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
IFT43Q96FT9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
IFT43Q96FT9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
IFT43Q96FT9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.21■■□□□ 1.15
IFT43Q96FT9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.21■■□□□ 1.15
IFT43Q96FT9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
IFT43Q96FT9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
IFT43Q96FT9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.21■■□□□ 1.15
IFT43Q96FT9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.21■■□□□ 1.15
IFT43Q96FT9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
IFT43Q96FT9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
IFT43Q96FT9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
IFT43Q96FT9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
IFT43Q96FT9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
IFT43Q96FT9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
IFT43Q96FT9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
IFT43Q96FT9 AC233723.2-201ENST00000623798 2106 ntBASIC22.21■■□□□ 1.15
IFT43Q96FT9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
IFT43Q96FT9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
IFT43Q96FT9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
IFT43Q96FT9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
IFT43Q96FT9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
IFT43Q96FT9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
IFT43Q96FT9 IRS3P-201ENST00000223076 1006 ntBASIC22.2■■□□□ 1.14
IFT43Q96FT9 AC097381.1-201ENST00000429019 1296 ntBASIC22.2■■□□□ 1.14
IFT43Q96FT9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.2■■□□□ 1.14
IFT43Q96FT9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
IFT43Q96FT9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.2■■□□□ 1.14
IFT43Q96FT9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
IFT43Q96FT9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.19■■□□□ 1.14
IFT43Q96FT9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.19■■□□□ 1.14
IFT43Q96FT9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.19■■□□□ 1.14
IFT43Q96FT9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
IFT43Q96FT9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
IFT43Q96FT9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
IFT43Q96FT9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.19■■□□□ 1.14
IFT43Q96FT9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
IFT43Q96FT9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
IFT43Q96FT9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
IFT43Q96FT9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
IFT43Q96FT9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
IFT43Q96FT9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
IFT43Q96FT9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
IFT43Q96FT9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.18■■□□□ 1.14
IFT43Q96FT9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.18■■□□□ 1.14
IFT43Q96FT9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
IFT43Q96FT9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
IFT43Q96FT9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
IFT43Q96FT9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
IFT43Q96FT9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
IFT43Q96FT9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.18■■□□□ 1.14
IFT43Q96FT9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.18■■□□□ 1.14
IFT43Q96FT9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.18■■□□□ 1.14
IFT43Q96FT9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
IFT43Q96FT9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
IFT43Q96FT9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
IFT43Q96FT9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.17■■□□□ 1.14
IFT43Q96FT9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
IFT43Q96FT9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
IFT43Q96FT9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.17■■□□□ 1.14
IFT43Q96FT9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
IFT43Q96FT9 OR2I1P-207ENST00000453522 948 ntBASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms