Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SIPA1Q96FS4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SIPA1Q96FS4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SIPA1Q96FS4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SIPA1Q96FS4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SIPA1Q96FS4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SIPA1Q96FS4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SIPA1Q96FS4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SIPA1Q96FS4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SIPA1Q96FS4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SIPA1Q96FS4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.8■■□□□ 1.08
SIPA1Q96FS4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.8■■□□□ 1.08
SIPA1Q96FS4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
SIPA1Q96FS4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SIPA1Q96FS4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SIPA1Q96FS4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIPA1Q96FS4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.79■■□□□ 1.08
SIPA1Q96FS4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SIPA1Q96FS4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIPA1Q96FS4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SIPA1Q96FS4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIPA1Q96FS4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIPA1Q96FS4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.79■■□□□ 1.08
SIPA1Q96FS4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.79■■□□□ 1.08
SIPA1Q96FS4 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.79■■□□□ 1.08
SIPA1Q96FS4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.79■■□□□ 1.08
SIPA1Q96FS4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
SIPA1Q96FS4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SIPA1Q96FS4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SIPA1Q96FS4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SIPA1Q96FS4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SIPA1Q96FS4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.78■■□□□ 1.08
SIPA1Q96FS4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.78■■□□□ 1.08
SIPA1Q96FS4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.78■■□□□ 1.08
SIPA1Q96FS4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.78■■□□□ 1.08
SIPA1Q96FS4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SIPA1Q96FS4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SIPA1Q96FS4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SIPA1Q96FS4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.78■■□□□ 1.08
SIPA1Q96FS4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SIPA1Q96FS4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SIPA1Q96FS4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SIPA1Q96FS4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SIPA1Q96FS4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SIPA1Q96FS4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SIPA1Q96FS4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SIPA1Q96FS4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SIPA1Q96FS4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.77■■□□□ 1.08
SIPA1Q96FS4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.77■■□□□ 1.08
SIPA1Q96FS4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SIPA1Q96FS4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.77■■□□□ 1.08
SIPA1Q96FS4 AC011767.1-201ENST00000617410 1153 ntBASIC21.77■■□□□ 1.08
SIPA1Q96FS4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.77■■□□□ 1.08
SIPA1Q96FS4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SIPA1Q96FS4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SIPA1Q96FS4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.77■■□□□ 1.07
SIPA1Q96FS4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
SIPA1Q96FS4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
SIPA1Q96FS4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIPA1Q96FS4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIPA1Q96FS4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIPA1Q96FS4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.76■■□□□ 1.07
SIPA1Q96FS4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SIPA1Q96FS4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SIPA1Q96FS4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SIPA1Q96FS4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.76■■□□□ 1.07
SIPA1Q96FS4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.76■■□□□ 1.07
SIPA1Q96FS4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SIPA1Q96FS4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SIPA1Q96FS4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SIPA1Q96FS4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.76■■□□□ 1.07
SIPA1Q96FS4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
SIPA1Q96FS4 KRT87P-202ENST00000534226 1464 ntBASIC21.76■■□□□ 1.07
SIPA1Q96FS4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIPA1Q96FS4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SIPA1Q96FS4 LINC01960-201ENST00000563759 1884 ntBASIC21.75■■□□□ 1.07
SIPA1Q96FS4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.75■■□□□ 1.07
SIPA1Q96FS4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
SIPA1Q96FS4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SIPA1Q96FS4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.75■■□□□ 1.07
SIPA1Q96FS4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SIPA1Q96FS4 AC006970.2-201ENST00000450065 779 ntBASIC21.74■■□□□ 1.07
SIPA1Q96FS4 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.74■■□□□ 1.07
SIPA1Q96FS4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.74■■□□□ 1.07
SIPA1Q96FS4 AC079089.2-201ENST00000531211 1277 ntBASIC21.74■■□□□ 1.07
SIPA1Q96FS4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.74■■□□□ 1.07
SIPA1Q96FS4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.74■■□□□ 1.07
SIPA1Q96FS4 AC104187.1-201ENST00000607510 612 ntBASIC21.74■■□□□ 1.07
SIPA1Q96FS4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.74■■□□□ 1.07
SIPA1Q96FS4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIPA1Q96FS4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SIPA1Q96FS4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.74■■□□□ 1.07
SIPA1Q96FS4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
SIPA1Q96FS4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.74■■□□□ 1.07
SIPA1Q96FS4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.74■■□□□ 1.07
SIPA1Q96FS4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.74■■□□□ 1.07
SIPA1Q96FS4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIPA1Q96FS4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.73■■□□□ 1.07
SIPA1Q96FS4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SIPA1Q96FS4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 950.8 ms