Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXRED1Q96CU9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXRED1Q96CU9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXRED1Q96CU9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.79■□□□□ 0.6
FOXRED1Q96CU9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
FOXRED1Q96CU9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
FOXRED1Q96CU9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXRED1Q96CU9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXRED1Q96CU9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXRED1Q96CU9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.79■□□□□ 0.6
FOXRED1Q96CU9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXRED1Q96CU9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.79■□□□□ 0.6
FOXRED1Q96CU9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FOXRED1Q96CU9 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FOXRED1Q96CU9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXRED1Q96CU9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
FOXRED1Q96CU9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXRED1Q96CU9 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.78■□□□□ 0.6
FOXRED1Q96CU9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXRED1Q96CU9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXRED1Q96CU9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.78■□□□□ 0.6
FOXRED1Q96CU9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FOXRED1Q96CU9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXRED1Q96CU9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.78■□□□□ 0.6
FOXRED1Q96CU9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.78■□□□□ 0.6
FOXRED1Q96CU9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXRED1Q96CU9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FOXRED1Q96CU9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXRED1Q96CU9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.77■□□□□ 0.6
FOXRED1Q96CU9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXRED1Q96CU9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXRED1Q96CU9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXRED1Q96CU9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXRED1Q96CU9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FOXRED1Q96CU9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXRED1Q96CU9 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
FOXRED1Q96CU9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXRED1Q96CU9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FOXRED1Q96CU9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.77■□□□□ 0.6
FOXRED1Q96CU9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXRED1Q96CU9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXRED1Q96CU9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
FOXRED1Q96CU9 AC004687.1-201ENST00000579003 1625 ntBASIC18.77■□□□□ 0.6
FOXRED1Q96CU9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FOXRED1Q96CU9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FOXRED1Q96CU9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
FOXRED1Q96CU9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 AC092028.1-203ENST00000608262 953 ntBASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXRED1Q96CU9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXRED1Q96CU9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXRED1Q96CU9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXRED1Q96CU9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.75■□□□□ 0.59
FOXRED1Q96CU9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXRED1Q96CU9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.75■□□□□ 0.59
FOXRED1Q96CU9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.75■□□□□ 0.59
FOXRED1Q96CU9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXRED1Q96CU9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXRED1Q96CU9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXRED1Q96CU9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
FOXRED1Q96CU9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms