Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.83■□□□□ 0.6
CSNK2A3Q8NEV1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.83■□□□□ 0.6
CSNK2A3Q8NEV1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSNK2A3Q8NEV1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
CSNK2A3Q8NEV1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CSNK2A3Q8NEV1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
CSNK2A3Q8NEV1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSNK2A3Q8NEV1 AC007375.3-201ENST00000600936 2314 ntBASIC18.83■□□□□ 0.6
CSNK2A3Q8NEV1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CSNK2A3Q8NEV1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 MIR3181-201ENST00000578512 73 ntBASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 AL138724.1-201ENST00000606771 1088 ntBASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CSNK2A3Q8NEV1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK2A3Q8NEV1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK2A3Q8NEV1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.81■□□□□ 0.6
CSNK2A3Q8NEV1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CSNK2A3Q8NEV1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.81■□□□□ 0.6
CSNK2A3Q8NEV1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK2A3Q8NEV1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK2A3Q8NEV1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CSNK2A3Q8NEV1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CSNK2A3Q8NEV1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK2A3Q8NEV1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.81■□□□□ 0.6
CSNK2A3Q8NEV1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK2A3Q8NEV1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CSNK2A3Q8NEV1 SYT6-210ENST00000641643 1587 ntBASIC18.81■□□□□ 0.6
CSNK2A3Q8NEV1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK2A3Q8NEV1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CSNK2A3Q8NEV1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK2A3Q8NEV1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK2A3Q8NEV1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK2A3Q8NEV1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.8■□□□□ 0.6
CSNK2A3Q8NEV1 AC131281.2-201ENST00000520478 145 ntBASIC18.8■□□□□ 0.6
CSNK2A3Q8NEV1 MIR4466-201ENST00000606121 54 ntBASIC18.8■□□□□ 0.6
CSNK2A3Q8NEV1 CA15P2-201ENST00000611168 834 ntBASIC18.8■□□□□ 0.6
CSNK2A3Q8NEV1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
CSNK2A3Q8NEV1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CSNK2A3Q8NEV1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.8■□□□□ 0.6
CSNK2A3Q8NEV1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK2A3Q8NEV1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK2A3Q8NEV1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.8■□□□□ 0.6
CSNK2A3Q8NEV1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CSNK2A3Q8NEV1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK2A3Q8NEV1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.79■□□□□ 0.6
CSNK2A3Q8NEV1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK2A3Q8NEV1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK2A3Q8NEV1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.79■□□□□ 0.6
CSNK2A3Q8NEV1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK2A3Q8NEV1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK2A3Q8NEV1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK2A3Q8NEV1 AC068587.7-201ENST00000641602 218 ntBASIC18.79■□□□□ 0.6
CSNK2A3Q8NEV1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK2A3Q8NEV1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK2A3Q8NEV1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.79■□□□□ 0.6
CSNK2A3Q8NEV1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK2A3Q8NEV1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CSNK2A3Q8NEV1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CSNK2A3Q8NEV1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK2A3Q8NEV1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK2A3Q8NEV1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
CSNK2A3Q8NEV1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK2A3Q8NEV1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK2A3Q8NEV1 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.78■□□□□ 0.6
CSNK2A3Q8NEV1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.78■□□□□ 0.6
CSNK2A3Q8NEV1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
CSNK2A3Q8NEV1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.78■□□□□ 0.6
CSNK2A3Q8NEV1 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.78■□□□□ 0.6
CSNK2A3Q8NEV1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CSNK2A3Q8NEV1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CSNK2A3Q8NEV1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
CSNK2A3Q8NEV1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CSNK2A3Q8NEV1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK2A3Q8NEV1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CSNK2A3Q8NEV1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.77■□□□□ 0.6
CSNK2A3Q8NEV1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK2A3Q8NEV1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.77■□□□□ 0.6
CSNK2A3Q8NEV1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CSNK2A3Q8NEV1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms