Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
ZNF248Q8NDW4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ZNF248Q8NDW4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF248Q8NDW4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF248Q8NDW4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF248Q8NDW4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF248Q8NDW4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF248Q8NDW4 AC004812.2-201ENST00000611079 2094 ntBASIC20.7■□□□□ 0.9
ZNF248Q8NDW4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF248Q8NDW4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
ZNF248Q8NDW4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF248Q8NDW4 AC231657.2-201ENST00000624556 255 ntBASIC20.7■□□□□ 0.9
ZNF248Q8NDW4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.7■□□□□ 0.9
ZNF248Q8NDW4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.7■□□□□ 0.9
ZNF248Q8NDW4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF248Q8NDW4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF248Q8NDW4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF248Q8NDW4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
ZNF248Q8NDW4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF248Q8NDW4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF248Q8NDW4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ZNF248Q8NDW4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF248Q8NDW4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.69■□□□□ 0.9
ZNF248Q8NDW4 FAM201B-201ENST00000458407 597 ntBASIC20.69■□□□□ 0.9
ZNF248Q8NDW4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF248Q8NDW4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.69■□□□□ 0.9
ZNF248Q8NDW4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.69■□□□□ 0.9
ZNF248Q8NDW4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.69■□□□□ 0.9
ZNF248Q8NDW4 MFSD11-216ENST00000590393 1141 ntBASIC20.69■□□□□ 0.9
ZNF248Q8NDW4 AC087239.1-201ENST00000622671 572 ntBASIC20.69■□□□□ 0.9
ZNF248Q8NDW4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF248Q8NDW4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZNF248Q8NDW4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF248Q8NDW4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.69■□□□□ 0.9
ZNF248Q8NDW4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 SLC29A4P1-201ENST00000398760 971 ntBASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.68■□□□□ 0.9
ZNF248Q8NDW4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF248Q8NDW4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF248Q8NDW4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
ZNF248Q8NDW4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF248Q8NDW4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF248Q8NDW4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF248Q8NDW4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF248Q8NDW4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.67■□□□□ 0.9
ZNF248Q8NDW4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF248Q8NDW4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF248Q8NDW4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF248Q8NDW4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF248Q8NDW4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF248Q8NDW4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF248Q8NDW4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.67■□□□□ 0.9
ZNF248Q8NDW4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF248Q8NDW4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ZNF248Q8NDW4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF248Q8NDW4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF248Q8NDW4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF248Q8NDW4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF248Q8NDW4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF248Q8NDW4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF248Q8NDW4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.66■□□□□ 0.9
ZNF248Q8NDW4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.66■□□□□ 0.9
ZNF248Q8NDW4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ZNF248Q8NDW4 AL050303.2-201ENST00000619798 666 ntBASIC20.66■□□□□ 0.9
ZNF248Q8NDW4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.66■□□□□ 0.9
ZNF248Q8NDW4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF248Q8NDW4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF248Q8NDW4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF248Q8NDW4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF248Q8NDW4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF248Q8NDW4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF248Q8NDW4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF248Q8NDW4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF248Q8NDW4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF248Q8NDW4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF248Q8NDW4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF248Q8NDW4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF248Q8NDW4 AC007322.1-201ENST00000426983 750 ntBASIC20.65■□□□□ 0.9
ZNF248Q8NDW4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.65■□□□□ 0.9
ZNF248Q8NDW4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.65■□□□□ 0.9
ZNF248Q8NDW4 SMUG1P1-201ENST00000590640 811 ntBASIC20.65■□□□□ 0.9
ZNF248Q8NDW4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF248Q8NDW4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms