Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.87■□□□□ 0.61
PNLDC1Q8NA58 DUX4L4-201ENST00000566884 1269 ntBASIC18.87■□□□□ 0.61
PNLDC1Q8NA58 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PNLDC1Q8NA58 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PNLDC1Q8NA58 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PNLDC1Q8NA58 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.86■□□□□ 0.61
PNLDC1Q8NA58 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.86■□□□□ 0.61
PNLDC1Q8NA58 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PNLDC1Q8NA58 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PNLDC1Q8NA58 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PNLDC1Q8NA58 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PNLDC1Q8NA58 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PNLDC1Q8NA58 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.86■□□□□ 0.61
PNLDC1Q8NA58 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.86■□□□□ 0.61
PNLDC1Q8NA58 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.86■□□□□ 0.61
PNLDC1Q8NA58 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PNLDC1Q8NA58 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PNLDC1Q8NA58 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
PNLDC1Q8NA58 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PNLDC1Q8NA58 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.86■□□□□ 0.61
PNLDC1Q8NA58 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PNLDC1Q8NA58 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.85■□□□□ 0.61
PNLDC1Q8NA58 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PNLDC1Q8NA58 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PNLDC1Q8NA58 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PNLDC1Q8NA58 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PNLDC1Q8NA58 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.85■□□□□ 0.61
PNLDC1Q8NA58 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PNLDC1Q8NA58 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PNLDC1Q8NA58 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PNLDC1Q8NA58 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.84■□□□□ 0.61
PNLDC1Q8NA58 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PNLDC1Q8NA58 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PNLDC1Q8NA58 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.84■□□□□ 0.61
PNLDC1Q8NA58 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PNLDC1Q8NA58 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.84■□□□□ 0.61
PNLDC1Q8NA58 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.84■□□□□ 0.61
PNLDC1Q8NA58 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PNLDC1Q8NA58 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PNLDC1Q8NA58 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PNLDC1Q8NA58 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PNLDC1Q8NA58 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PNLDC1Q8NA58 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.83■□□□□ 0.61
PNLDC1Q8NA58 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.83■□□□□ 0.61
PNLDC1Q8NA58 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PNLDC1Q8NA58 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PNLDC1Q8NA58 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.83■□□□□ 0.61
PNLDC1Q8NA58 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PNLDC1Q8NA58 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
PNLDC1Q8NA58 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PNLDC1Q8NA58 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.83■□□□□ 0.6
PNLDC1Q8NA58 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.83■□□□□ 0.6
PNLDC1Q8NA58 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.83■□□□□ 0.6
PNLDC1Q8NA58 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PNLDC1Q8NA58 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PNLDC1Q8NA58 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PNLDC1Q8NA58 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.83■□□□□ 0.6
PNLDC1Q8NA58 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PNLDC1Q8NA58 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PNLDC1Q8NA58 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PNLDC1Q8NA58 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PNLDC1Q8NA58 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PNLDC1Q8NA58 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.82■□□□□ 0.6
PNLDC1Q8NA58 FBXW4P1-201ENST00000426721 2239 ntBASIC18.82■□□□□ 0.6
PNLDC1Q8NA58 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PNLDC1Q8NA58 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.82■□□□□ 0.6
PNLDC1Q8NA58 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PNLDC1Q8NA58 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PNLDC1Q8NA58 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.82■□□□□ 0.6
PNLDC1Q8NA58 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.82■□□□□ 0.6
PNLDC1Q8NA58 AC131281.2-201ENST00000520478 145 ntBASIC18.82■□□□□ 0.6
PNLDC1Q8NA58 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PNLDC1Q8NA58 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PNLDC1Q8NA58 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PNLDC1Q8NA58 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PNLDC1Q8NA58 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.82■□□□□ 0.6
PNLDC1Q8NA58 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNLDC1Q8NA58 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNLDC1Q8NA58 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PNLDC1Q8NA58 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNLDC1Q8NA58 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PNLDC1Q8NA58 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.81■□□□□ 0.6
PNLDC1Q8NA58 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNLDC1Q8NA58 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNLDC1Q8NA58 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PNLDC1Q8NA58 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PNLDC1Q8NA58 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PNLDC1Q8NA58 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PNLDC1Q8NA58 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PNLDC1Q8NA58 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PNLDC1Q8NA58 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNLDC1Q8NA58 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNLDC1Q8NA58 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PNLDC1Q8NA58 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PNLDC1Q8NA58 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PNLDC1Q8NA58 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.8■□□□□ 0.6
PNLDC1Q8NA58 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PNLDC1Q8NA58 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.8■□□□□ 0.6
PNLDC1Q8NA58 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PNLDC1Q8NA58 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms