Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC30.39■■■□□ 2.45
ARHGEF28Q8N1W1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
ARHGEF28Q8N1W1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
ARHGEF28Q8N1W1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
ARHGEF28Q8N1W1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC30.38■■■□□ 2.45
ARHGEF28Q8N1W1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
ARHGEF28Q8N1W1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
ARHGEF28Q8N1W1 PPP1R14BP3-201ENST00000509033 445 ntBASIC30.38■■■□□ 2.45
ARHGEF28Q8N1W1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC30.38■■■□□ 2.45
ARHGEF28Q8N1W1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC30.38■■■□□ 2.45
ARHGEF28Q8N1W1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC30.38■■■□□ 2.45
ARHGEF28Q8N1W1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
ARHGEF28Q8N1W1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
ARHGEF28Q8N1W1 KRT18P11-201ENST00000435214 1283 ntBASIC30.37■■■□□ 2.45
ARHGEF28Q8N1W1 GXYLT1P5-201ENST00000614548 1189 ntBASIC30.37■■■□□ 2.45
ARHGEF28Q8N1W1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
ARHGEF28Q8N1W1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
ARHGEF28Q8N1W1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
ARHGEF28Q8N1W1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
ARHGEF28Q8N1W1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
ARHGEF28Q8N1W1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC30.37■■■□□ 2.45
ARHGEF28Q8N1W1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
ARHGEF28Q8N1W1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
ARHGEF28Q8N1W1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ARHGEF28Q8N1W1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC30.36■■■□□ 2.45
ARHGEF28Q8N1W1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC30.36■■■□□ 2.45
ARHGEF28Q8N1W1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ARHGEF28Q8N1W1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
ARHGEF28Q8N1W1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC30.36■■■□□ 2.45
ARHGEF28Q8N1W1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ARHGEF28Q8N1W1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC30.36■■■□□ 2.45
ARHGEF28Q8N1W1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC30.36■■■□□ 2.45
ARHGEF28Q8N1W1 AC079089.2-201ENST00000531211 1277 ntBASIC30.36■■■□□ 2.45
ARHGEF28Q8N1W1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC30.36■■■□□ 2.45
ARHGEF28Q8N1W1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
ARHGEF28Q8N1W1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
ARHGEF28Q8N1W1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC30.35■■■□□ 2.45
ARHGEF28Q8N1W1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
ARHGEF28Q8N1W1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
ARHGEF28Q8N1W1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
ARHGEF28Q8N1W1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC30.35■■■□□ 2.45
ARHGEF28Q8N1W1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
ARHGEF28Q8N1W1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
ARHGEF28Q8N1W1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC30.34■■■□□ 2.45
ARHGEF28Q8N1W1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC30.34■■■□□ 2.45
ARHGEF28Q8N1W1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
ARHGEF28Q8N1W1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC30.34■■■□□ 2.45
ARHGEF28Q8N1W1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
ARHGEF28Q8N1W1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC30.34■■■□□ 2.45
ARHGEF28Q8N1W1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
ARHGEF28Q8N1W1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
ARHGEF28Q8N1W1 ESRRAP2-201ENST00000418437 1549 ntBASIC30.34■■■□□ 2.45
ARHGEF28Q8N1W1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
ARHGEF28Q8N1W1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
ARHGEF28Q8N1W1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC30.33■■■□□ 2.45
ARHGEF28Q8N1W1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
ARHGEF28Q8N1W1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
ARHGEF28Q8N1W1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC30.33■■■□□ 2.45
ARHGEF28Q8N1W1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC30.33■■■□□ 2.45
ARHGEF28Q8N1W1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC30.33■■■□□ 2.45
ARHGEF28Q8N1W1 MYCNOS-205ENST00000641950 531 ntBASIC30.33■■■□□ 2.45
ARHGEF28Q8N1W1 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC30.33■■■□□ 2.45
ARHGEF28Q8N1W1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC30.32■■■□□ 2.44
ARHGEF28Q8N1W1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC30.32■■■□□ 2.44
ARHGEF28Q8N1W1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
ARHGEF28Q8N1W1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC30.32■■■□□ 2.44
ARHGEF28Q8N1W1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC30.32■■■□□ 2.44
ARHGEF28Q8N1W1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC30.32■■■□□ 2.44
ARHGEF28Q8N1W1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
ARHGEF28Q8N1W1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
ARHGEF28Q8N1W1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC30.32■■■□□ 2.44
ARHGEF28Q8N1W1 LINC00526-201ENST00000581067 1875 ntBASIC30.32■■■□□ 2.44
ARHGEF28Q8N1W1 AP006587.3-201ENST00000525742 1516 ntBASIC30.32■■■□□ 2.44
ARHGEF28Q8N1W1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
ARHGEF28Q8N1W1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC30.32■■■□□ 2.44
ARHGEF28Q8N1W1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
ARHGEF28Q8N1W1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
ARHGEF28Q8N1W1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
ARHGEF28Q8N1W1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
ARHGEF28Q8N1W1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC30.31■■■□□ 2.44
ARHGEF28Q8N1W1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC30.31■■■□□ 2.44
ARHGEF28Q8N1W1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC30.31■■■□□ 2.44
ARHGEF28Q8N1W1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
ARHGEF28Q8N1W1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC30.31■■■□□ 2.44
ARHGEF28Q8N1W1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
ARHGEF28Q8N1W1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
ARHGEF28Q8N1W1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
ARHGEF28Q8N1W1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ARHGEF28Q8N1W1 GUSBP6-202ENST00000438529 1198 ntBASIC30.3■■■□□ 2.44
ARHGEF28Q8N1W1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC30.3■■■□□ 2.44
ARHGEF28Q8N1W1 AC011767.1-201ENST00000617410 1153 ntBASIC30.3■■■□□ 2.44
ARHGEF28Q8N1W1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ARHGEF28Q8N1W1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
ARHGEF28Q8N1W1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ARHGEF28Q8N1W1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
ARHGEF28Q8N1W1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
ARHGEF28Q8N1W1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC30.3■■■□□ 2.44
ARHGEF28Q8N1W1 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
ARHGEF28Q8N1W1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
ARHGEF28Q8N1W1 DUX4L16-201ENST00000555130 1264 ntBASIC30.3■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms