Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.26■■□□□ 1.31
CCDC105Q8IYK2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC23.26■■□□□ 1.31
CCDC105Q8IYK2 AC123595.1-201ENST00000440769 1046 ntBASIC23.26■■□□□ 1.31
CCDC105Q8IYK2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CCDC105Q8IYK2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.26■■□□□ 1.31
CCDC105Q8IYK2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC105Q8IYK2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CCDC105Q8IYK2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC105Q8IYK2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CCDC105Q8IYK2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC105Q8IYK2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC105Q8IYK2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.25■■□□□ 1.31
CCDC105Q8IYK2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.25■■□□□ 1.31
CCDC105Q8IYK2 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.25■■□□□ 1.31
CCDC105Q8IYK2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.25■■□□□ 1.31
CCDC105Q8IYK2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.25■■□□□ 1.31
CCDC105Q8IYK2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CCDC105Q8IYK2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
CCDC105Q8IYK2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC105Q8IYK2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC105Q8IYK2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 AC127496.7-201ENST00000625110 1798 ntBASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 AC027612.3-201ENST00000413684 1047 ntBASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 AC009086.3-201ENST00000623486 1008 ntBASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC105Q8IYK2 ESRRAP2-201ENST00000418437 1549 ntBASIC23.23■■□□□ 1.31
CCDC105Q8IYK2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.23■■□□□ 1.31
CCDC105Q8IYK2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC105Q8IYK2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC105Q8IYK2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC105Q8IYK2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC105Q8IYK2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC105Q8IYK2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.23■■□□□ 1.31
CCDC105Q8IYK2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC105Q8IYK2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.23■■□□□ 1.31
CCDC105Q8IYK2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CCDC105Q8IYK2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC105Q8IYK2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC105Q8IYK2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC105Q8IYK2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.22■■□□□ 1.31
CCDC105Q8IYK2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.22■■□□□ 1.31
CCDC105Q8IYK2 AC126544.1-201ENST00000580842 1059 ntBASIC23.22■■□□□ 1.31
CCDC105Q8IYK2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.22■■□□□ 1.31
CCDC105Q8IYK2 AL358852.1-201ENST00000623174 1268 ntBASIC23.22■■□□□ 1.31
CCDC105Q8IYK2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC105Q8IYK2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC105Q8IYK2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.22■■□□□ 1.31
CCDC105Q8IYK2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC105Q8IYK2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC105Q8IYK2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CCDC105Q8IYK2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC105Q8IYK2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC105Q8IYK2 AC242852.2-201ENST00000615738 1807 ntBASIC23.21■■□□□ 1.31
CCDC105Q8IYK2 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC105Q8IYK2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC105Q8IYK2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC105Q8IYK2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
CCDC105Q8IYK2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CCDC105Q8IYK2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CCDC105Q8IYK2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.2■■□□□ 1.3
CCDC105Q8IYK2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.2■■□□□ 1.3
CCDC105Q8IYK2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CCDC105Q8IYK2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
CCDC105Q8IYK2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC105Q8IYK2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CCDC105Q8IYK2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC105Q8IYK2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC105Q8IYK2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC105Q8IYK2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC105Q8IYK2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC105Q8IYK2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CCDC105Q8IYK2 TSPY26P-201ENST00000476365 1326 ntBASIC23.19■■□□□ 1.3
CCDC105Q8IYK2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC105Q8IYK2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CCDC105Q8IYK2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.19■■□□□ 1.3
CCDC105Q8IYK2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC105Q8IYK2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC105Q8IYK2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CCDC105Q8IYK2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.19■■□□□ 1.3
CCDC105Q8IYK2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.19■■□□□ 1.3
CCDC105Q8IYK2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms