Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC146Q8IYE0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC28.81■■■□□ 2.2
CCDC146Q8IYE0 AC079089.2-201ENST00000531211 1277 ntBASIC28.81■■■□□ 2.2
CCDC146Q8IYE0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC28.81■■■□□ 2.2
CCDC146Q8IYE0 AC087239.1-201ENST00000622671 572 ntBASIC28.81■■■□□ 2.2
CCDC146Q8IYE0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
CCDC146Q8IYE0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC146Q8IYE0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
CCDC146Q8IYE0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC28.8■■■□□ 2.2
CCDC146Q8IYE0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC28.8■■■□□ 2.2
CCDC146Q8IYE0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CCDC146Q8IYE0 AC019069.1-201ENST00000610008 1333 ntBASIC28.8■■■□□ 2.2
CCDC146Q8IYE0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CCDC146Q8IYE0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC28.8■■■□□ 2.2
CCDC146Q8IYE0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC28.8■■■□□ 2.2
CCDC146Q8IYE0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC28.8■■■□□ 2.2
CCDC146Q8IYE0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
CCDC146Q8IYE0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CCDC146Q8IYE0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CCDC146Q8IYE0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
CCDC146Q8IYE0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC146Q8IYE0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC28.79■■■□□ 2.2
CCDC146Q8IYE0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC146Q8IYE0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC28.79■■■□□ 2.2
CCDC146Q8IYE0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CCDC146Q8IYE0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
CCDC146Q8IYE0 AL117328.2-201ENST00000624617 1940 ntBASIC28.79■■■□□ 2.2
CCDC146Q8IYE0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC28.78■■■□□ 2.2
CCDC146Q8IYE0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CCDC146Q8IYE0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC28.78■■■□□ 2.2
CCDC146Q8IYE0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC28.78■■■□□ 2.2
CCDC146Q8IYE0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC28.78■■■□□ 2.2
CCDC146Q8IYE0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CCDC146Q8IYE0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC28.78■■■□□ 2.2
CCDC146Q8IYE0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC28.78■■■□□ 2.2
CCDC146Q8IYE0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC28.78■■■□□ 2.2
CCDC146Q8IYE0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC28.78■■■□□ 2.2
CCDC146Q8IYE0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CCDC146Q8IYE0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CCDC146Q8IYE0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
CCDC146Q8IYE0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CCDC146Q8IYE0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CCDC146Q8IYE0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC146Q8IYE0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC146Q8IYE0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC146Q8IYE0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC146Q8IYE0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC28.77■■■□□ 2.2
CCDC146Q8IYE0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CCDC146Q8IYE0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
CCDC146Q8IYE0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC28.76■■■□□ 2.2
CCDC146Q8IYE0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CCDC146Q8IYE0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC28.76■■■□□ 2.19
CCDC146Q8IYE0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CCDC146Q8IYE0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CCDC146Q8IYE0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CCDC146Q8IYE0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC28.76■■■□□ 2.19
CCDC146Q8IYE0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CCDC146Q8IYE0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CCDC146Q8IYE0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CCDC146Q8IYE0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC28.76■■■□□ 2.19
CCDC146Q8IYE0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CCDC146Q8IYE0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC28.75■■■□□ 2.19
CCDC146Q8IYE0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CCDC146Q8IYE0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CCDC146Q8IYE0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CCDC146Q8IYE0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC28.75■■■□□ 2.19
CCDC146Q8IYE0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC28.75■■■□□ 2.19
CCDC146Q8IYE0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CCDC146Q8IYE0 SMUG1P1-201ENST00000590640 811 ntBASIC28.75■■■□□ 2.19
CCDC146Q8IYE0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC28.75■■■□□ 2.19
CCDC146Q8IYE0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
CCDC146Q8IYE0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CCDC146Q8IYE0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CCDC146Q8IYE0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC28.74■■■□□ 2.19
CCDC146Q8IYE0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CCDC146Q8IYE0 MIR572-201ENST00000384983 95 ntBASIC28.74■■■□□ 2.19
CCDC146Q8IYE0 MIR6084-201ENST00000622012 110 ntBASIC28.74■■■□□ 2.19
CCDC146Q8IYE0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC28.74■■■□□ 2.19
CCDC146Q8IYE0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
CCDC146Q8IYE0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC28.73■■■□□ 2.19
CCDC146Q8IYE0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CCDC146Q8IYE0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CCDC146Q8IYE0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CCDC146Q8IYE0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CCDC146Q8IYE0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CCDC146Q8IYE0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
CCDC146Q8IYE0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
CCDC146Q8IYE0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC28.73■■■□□ 2.19
CCDC146Q8IYE0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CCDC146Q8IYE0 AC242852.2-201ENST00000615738 1807 ntBASIC28.73■■■□□ 2.19
CCDC146Q8IYE0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CCDC146Q8IYE0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
CCDC146Q8IYE0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CCDC146Q8IYE0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC28.72■■■□□ 2.19
CCDC146Q8IYE0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
CCDC146Q8IYE0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CCDC146Q8IYE0 IRS3P-201ENST00000223076 1006 ntBASIC28.72■■■□□ 2.19
CCDC146Q8IYE0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CCDC146Q8IYE0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC28.72■■■□□ 2.19
CCDC146Q8IYE0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC28.72■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms