Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RP1L1Q8IWN7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.63■□□□□ 0.73
RP1L1Q8IWN7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RP1L1Q8IWN7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RP1L1Q8IWN7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RP1L1Q8IWN7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.63■□□□□ 0.73
RP1L1Q8IWN7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.63■□□□□ 0.73
RP1L1Q8IWN7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.63■□□□□ 0.73
RP1L1Q8IWN7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.63■□□□□ 0.73
RP1L1Q8IWN7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.63■□□□□ 0.73
RP1L1Q8IWN7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.63■□□□□ 0.73
RP1L1Q8IWN7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.63■□□□□ 0.73
RP1L1Q8IWN7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RP1L1Q8IWN7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RP1L1Q8IWN7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RP1L1Q8IWN7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RP1L1Q8IWN7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.63■□□□□ 0.73
RP1L1Q8IWN7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RP1L1Q8IWN7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 TSPY6P-201ENST00000448518 926 ntBASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 UBE2DNL-204ENST00000602536 740 ntBASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 AC104187.1-201ENST00000607510 612 ntBASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RP1L1Q8IWN7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
RP1L1Q8IWN7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RP1L1Q8IWN7 AC079630.1-202ENST00000618127 1840 ntBASIC19.6■□□□□ 0.73
RP1L1Q8IWN7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RP1L1Q8IWN7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.6■□□□□ 0.73
RP1L1Q8IWN7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.6■□□□□ 0.73
RP1L1Q8IWN7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.6■□□□□ 0.73
RP1L1Q8IWN7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.6■□□□□ 0.73
RP1L1Q8IWN7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RP1L1Q8IWN7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.6■□□□□ 0.73
RP1L1Q8IWN7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.6■□□□□ 0.73
RP1L1Q8IWN7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
RP1L1Q8IWN7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RP1L1Q8IWN7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.6■□□□□ 0.73
RP1L1Q8IWN7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RP1L1Q8IWN7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RP1L1Q8IWN7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RP1L1Q8IWN7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RP1L1Q8IWN7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RP1L1Q8IWN7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.59■□□□□ 0.73
RP1L1Q8IWN7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RP1L1Q8IWN7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RP1L1Q8IWN7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RP1L1Q8IWN7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RP1L1Q8IWN7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.59■□□□□ 0.73
RP1L1Q8IWN7 AC231657.2-201ENST00000624556 255 ntBASIC19.59■□□□□ 0.73
RP1L1Q8IWN7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RP1L1Q8IWN7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RP1L1Q8IWN7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RP1L1Q8IWN7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RP1L1Q8IWN7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RP1L1Q8IWN7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.59■□□□□ 0.73
RP1L1Q8IWN7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
RP1L1Q8IWN7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RP1L1Q8IWN7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RP1L1Q8IWN7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RP1L1Q8IWN7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.58■□□□□ 0.73
RP1L1Q8IWN7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RP1L1Q8IWN7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RP1L1Q8IWN7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
RP1L1Q8IWN7 ITM2C-210ENST00000620962 501 ntBASIC19.58■□□□□ 0.73
RP1L1Q8IWN7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RP1L1Q8IWN7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.58■□□□□ 0.72
RP1L1Q8IWN7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms