Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCDC60Q8IWA6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CCDC60Q8IWA6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCDC60Q8IWA6 AC092437.1-201ENST00000624794 1048 ntBASIC24.22■■□□□ 1.47
CCDC60Q8IWA6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
CCDC60Q8IWA6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCDC60Q8IWA6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCDC60Q8IWA6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCDC60Q8IWA6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
CCDC60Q8IWA6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC24.21■■□□□ 1.47
CCDC60Q8IWA6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CCDC60Q8IWA6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CCDC60Q8IWA6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCDC60Q8IWA6 LINC00526-201ENST00000581067 1875 ntBASIC24.21■■□□□ 1.47
CCDC60Q8IWA6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.21■■□□□ 1.47
CCDC60Q8IWA6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CCDC60Q8IWA6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CCDC60Q8IWA6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.47
CCDC60Q8IWA6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.47
CCDC60Q8IWA6 C9orf163-202ENST00000624034 2573 ntBASIC24.2■■□□□ 1.47
CCDC60Q8IWA6 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.2■■□□□ 1.46
CCDC60Q8IWA6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC60Q8IWA6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC60Q8IWA6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC24.2■■□□□ 1.46
CCDC60Q8IWA6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.2■■□□□ 1.46
CCDC60Q8IWA6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC60Q8IWA6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CCDC60Q8IWA6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC60Q8IWA6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.19■■□□□ 1.46
CCDC60Q8IWA6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC60Q8IWA6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC60Q8IWA6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC60Q8IWA6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC24.19■■□□□ 1.46
CCDC60Q8IWA6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC60Q8IWA6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
CCDC60Q8IWA6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.19■■□□□ 1.46
CCDC60Q8IWA6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.19■■□□□ 1.46
CCDC60Q8IWA6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.19■■□□□ 1.46
CCDC60Q8IWA6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC60Q8IWA6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC60Q8IWA6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC60Q8IWA6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC60Q8IWA6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCDC60Q8IWA6 AC137767.1-201ENST00000602918 1920 ntBASIC24.18■■□□□ 1.46
CCDC60Q8IWA6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC60Q8IWA6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
CCDC60Q8IWA6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
CCDC60Q8IWA6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.18■■□□□ 1.46
CCDC60Q8IWA6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.18■■□□□ 1.46
CCDC60Q8IWA6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.18■■□□□ 1.46
CCDC60Q8IWA6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC60Q8IWA6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCDC60Q8IWA6 AC004854.2-201ENST00000608450 1441 ntBASIC24.18■■□□□ 1.46
CCDC60Q8IWA6 AC005224.4-201ENST00000583262 1652 ntBASIC24.18■■□□□ 1.46
CCDC60Q8IWA6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC60Q8IWA6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC24.17■■□□□ 1.46
CCDC60Q8IWA6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC60Q8IWA6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.17■■□□□ 1.46
CCDC60Q8IWA6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.17■■□□□ 1.46
CCDC60Q8IWA6 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.17■■□□□ 1.46
CCDC60Q8IWA6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.17■■□□□ 1.46
CCDC60Q8IWA6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.17■■□□□ 1.46
CCDC60Q8IWA6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.17■■□□□ 1.46
CCDC60Q8IWA6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC24.17■■□□□ 1.46
CCDC60Q8IWA6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
CCDC60Q8IWA6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.17■■□□□ 1.46
CCDC60Q8IWA6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC60Q8IWA6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC60Q8IWA6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
CCDC60Q8IWA6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
CCDC60Q8IWA6 AP004607.4-201ENST00000530158 1459 ntBASIC24.16■■□□□ 1.46
CCDC60Q8IWA6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC60Q8IWA6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC60Q8IWA6 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.16■■□□□ 1.46
CCDC60Q8IWA6 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
CCDC60Q8IWA6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.16■■□□□ 1.46
CCDC60Q8IWA6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.16■■□□□ 1.46
CCDC60Q8IWA6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC60Q8IWA6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.16■■□□□ 1.46
CCDC60Q8IWA6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CCDC60Q8IWA6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
CCDC60Q8IWA6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC60Q8IWA6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC60Q8IWA6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC60Q8IWA6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CCDC60Q8IWA6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC60Q8IWA6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
CCDC60Q8IWA6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.15■■□□□ 1.46
CCDC60Q8IWA6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CCDC60Q8IWA6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC24.15■■□□□ 1.46
CCDC60Q8IWA6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.15■■□□□ 1.46
CCDC60Q8IWA6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.14■■□□□ 1.46
CCDC60Q8IWA6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.14■■□□□ 1.46
CCDC60Q8IWA6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CCDC60Q8IWA6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24.14■■□□□ 1.45
CCDC60Q8IWA6 AC009237.3-201ENST00000393279 1427 ntBASIC24.14■■□□□ 1.45
CCDC60Q8IWA6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.14■■□□□ 1.45
CCDC60Q8IWA6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.14■■□□□ 1.45
CCDC60Q8IWA6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CCDC60Q8IWA6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms