Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VRK2Q86Y07 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VRK2Q86Y07 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.05■□□□□ 0.8
VRK2Q86Y07 AC092171.4-201ENST00000609130 632 ntBASIC20.05■□□□□ 0.8
VRK2Q86Y07 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.05■□□□□ 0.8
VRK2Q86Y07 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VRK2Q86Y07 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VRK2Q86Y07 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.05■□□□□ 0.8
VRK2Q86Y07 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VRK2Q86Y07 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
VRK2Q86Y07 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.05■□□□□ 0.8
VRK2Q86Y07 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VRK2Q86Y07 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VRK2Q86Y07 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VRK2Q86Y07 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.04■□□□□ 0.8
VRK2Q86Y07 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VRK2Q86Y07 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
VRK2Q86Y07 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VRK2Q86Y07 AC010542.4-201ENST00000563151 1910 ntBASIC20.04■□□□□ 0.8
VRK2Q86Y07 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VRK2Q86Y07 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.04■□□□□ 0.8
VRK2Q86Y07 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.04■□□□□ 0.8
VRK2Q86Y07 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VRK2Q86Y07 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VRK2Q86Y07 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.04■□□□□ 0.8
VRK2Q86Y07 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
VRK2Q86Y07 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VRK2Q86Y07 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VRK2Q86Y07 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VRK2Q86Y07 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VRK2Q86Y07 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VRK2Q86Y07 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VRK2Q86Y07 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VRK2Q86Y07 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.03■□□□□ 0.8
VRK2Q86Y07 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.03■□□□□ 0.8
VRK2Q86Y07 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VRK2Q86Y07 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
VRK2Q86Y07 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.03■□□□□ 0.8
VRK2Q86Y07 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VRK2Q86Y07 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
VRK2Q86Y07 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VRK2Q86Y07 SERBP1P1-201ENST00000396021 1160 ntBASIC20.02■□□□□ 0.8
VRK2Q86Y07 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VRK2Q86Y07 OR2I1P-207ENST00000453522 948 ntBASIC20.02■□□□□ 0.8
VRK2Q86Y07 AC131281.2-201ENST00000520478 145 ntBASIC20.02■□□□□ 0.8
VRK2Q86Y07 AC010525.1-201ENST00000585559 441 ntBASIC20.02■□□□□ 0.8
VRK2Q86Y07 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.02■□□□□ 0.8
VRK2Q86Y07 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.02■□□□□ 0.8
VRK2Q86Y07 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
VRK2Q86Y07 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VRK2Q86Y07 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
VRK2Q86Y07 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
VRK2Q86Y07 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
VRK2Q86Y07 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
VRK2Q86Y07 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VRK2Q86Y07 FAM99A-202ENST00000538190 1989 ntBASIC20.01■□□□□ 0.79
VRK2Q86Y07 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VRK2Q86Y07 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VRK2Q86Y07 AC079089.2-201ENST00000531211 1277 ntBASIC20.01■□□□□ 0.79
VRK2Q86Y07 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.01■□□□□ 0.79
VRK2Q86Y07 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VRK2Q86Y07 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VRK2Q86Y07 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
VRK2Q86Y07 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.01■□□□□ 0.79
VRK2Q86Y07 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VRK2Q86Y07 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20■□□□□ 0.79
VRK2Q86Y07 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
VRK2Q86Y07 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
VRK2Q86Y07 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
VRK2Q86Y07 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20■□□□□ 0.79
VRK2Q86Y07 SYT6-210ENST00000641643 1587 ntBASIC20■□□□□ 0.79
VRK2Q86Y07 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
VRK2Q86Y07 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
VRK2Q86Y07 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
VRK2Q86Y07 HES6-206ENST00000409574 738 ntTSL 2 BASIC20■□□□□ 0.79
VRK2Q86Y07 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20■□□□□ 0.79
VRK2Q86Y07 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20■□□□□ 0.79
VRK2Q86Y07 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
VRK2Q86Y07 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20■□□□□ 0.79
VRK2Q86Y07 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20■□□□□ 0.79
VRK2Q86Y07 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VRK2Q86Y07 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
VRK2Q86Y07 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VRK2Q86Y07 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VRK2Q86Y07 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VRK2Q86Y07 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.99■□□□□ 0.79
VRK2Q86Y07 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VRK2Q86Y07 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
VRK2Q86Y07 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.99■□□□□ 0.79
VRK2Q86Y07 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VRK2Q86Y07 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VRK2Q86Y07 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
VRK2Q86Y07 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VRK2Q86Y07 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.98■□□□□ 0.79
VRK2Q86Y07 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VRK2Q86Y07 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VRK2Q86Y07 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.98■□□□□ 0.79
VRK2Q86Y07 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.98■□□□□ 0.79
VRK2Q86Y07 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.98■□□□□ 0.79
VRK2Q86Y07 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms