Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
LRRTM4Q86VH4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRTM4Q86VH4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRRTM4Q86VH4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRRTM4Q86VH4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRRTM4Q86VH4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.29■■□□□ 1
LRRTM4Q86VH4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.29■■□□□ 1
LRRTM4Q86VH4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LRRTM4Q86VH4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.29■■□□□ 1
LRRTM4Q86VH4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRRTM4Q86VH4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.29■■□□□ 1
LRRTM4Q86VH4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRRTM4Q86VH4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRRTM4Q86VH4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRRTM4Q86VH4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
LRRTM4Q86VH4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRTM4Q86VH4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRTM4Q86VH4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.28■■□□□ 1
LRRTM4Q86VH4 LINC02228-203ENST00000641970 1355 ntBASIC21.28■■□□□ 1
LRRTM4Q86VH4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.28■■□□□ 1
LRRTM4Q86VH4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.28■■□□□ 1
LRRTM4Q86VH4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.28■■□□□ 1
LRRTM4Q86VH4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.28■■□□□ 1
LRRTM4Q86VH4 LINC00526-201ENST00000581067 1875 ntBASIC21.28■■□□□ 1
LRRTM4Q86VH4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRRTM4Q86VH4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRRTM4Q86VH4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRRTM4Q86VH4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRTM4Q86VH4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRRTM4Q86VH4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRTM4Q86VH4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRTM4Q86VH4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRRTM4Q86VH4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
LRRTM4Q86VH4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRRTM4Q86VH4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.27■■□□□ 1
LRRTM4Q86VH4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
LRRTM4Q86VH4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRTM4Q86VH4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRTM4Q86VH4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRTM4Q86VH4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LRRTM4Q86VH4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.26■□□□□ 0.99
LRRTM4Q86VH4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
LRRTM4Q86VH4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRTM4Q86VH4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LRRTM4Q86VH4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRTM4Q86VH4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.26■□□□□ 0.99
LRRTM4Q86VH4 TPRG1LP1-201ENST00000598702 760 ntBASIC21.26■□□□□ 0.99
LRRTM4Q86VH4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.26■□□□□ 0.99
LRRTM4Q86VH4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRTM4Q86VH4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LRRTM4Q86VH4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.26■□□□□ 0.99
LRRTM4Q86VH4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
LRRTM4Q86VH4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LRRTM4Q86VH4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LRRTM4Q86VH4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.25■□□□□ 0.99
LRRTM4Q86VH4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LRRTM4Q86VH4 AC034268.1-201ENST00000441047 882 ntBASIC21.25■□□□□ 0.99
LRRTM4Q86VH4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.25■□□□□ 0.99
LRRTM4Q86VH4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.25■□□□□ 0.99
LRRTM4Q86VH4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.25■□□□□ 0.99
LRRTM4Q86VH4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRTM4Q86VH4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRTM4Q86VH4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LRRTM4Q86VH4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.25■□□□□ 0.99
LRRTM4Q86VH4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.25■□□□□ 0.99
LRRTM4Q86VH4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
LRRTM4Q86VH4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.24■□□□□ 0.99
LRRTM4Q86VH4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.24■□□□□ 0.99
LRRTM4Q86VH4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LRRTM4Q86VH4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRTM4Q86VH4 AC127496.7-201ENST00000625110 1798 ntBASIC21.24■□□□□ 0.99
LRRTM4Q86VH4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.24■□□□□ 0.99
LRRTM4Q86VH4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRTM4Q86VH4 CCDC92B-201ENST00000575506 885 ntBASIC21.24■□□□□ 0.99
LRRTM4Q86VH4 AC139530.1-201ENST00000575312 1977 ntBASIC21.24■□□□□ 0.99
LRRTM4Q86VH4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
LRRTM4Q86VH4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.24■□□□□ 0.99
LRRTM4Q86VH4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LRRTM4Q86VH4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LRRTM4Q86VH4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
LRRTM4Q86VH4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRRTM4Q86VH4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRRTM4Q86VH4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.23■□□□□ 0.99
LRRTM4Q86VH4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LRRTM4Q86VH4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRTM4Q86VH4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRTM4Q86VH4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
LRRTM4Q86VH4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
LRRTM4Q86VH4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
LRRTM4Q86VH4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.23■□□□□ 0.99
LRRTM4Q86VH4 TERF1P2-201ENST00000583350 1212 ntBASIC21.23■□□□□ 0.99
LRRTM4Q86VH4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
LRRTM4Q86VH4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRTM4Q86VH4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
LRRTM4Q86VH4 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRRTM4Q86VH4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRRTM4Q86VH4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LRRTM4Q86VH4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.22■□□□□ 0.99
LRRTM4Q86VH4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LRRTM4Q86VH4 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms