Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RSPH3Q86UC2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
RSPH3Q86UC2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
RSPH3Q86UC2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.92■■□□□ 1.42
RSPH3Q86UC2 CDCA4P2-201ENST00000441182 718 ntBASIC23.92■■□□□ 1.42
RSPH3Q86UC2 AC026185.1-201ENST00000445748 174 ntBASIC23.92■■□□□ 1.42
RSPH3Q86UC2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RSPH3Q86UC2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
RSPH3Q86UC2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RSPH3Q86UC2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RSPH3Q86UC2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.92■■□□□ 1.42
RSPH3Q86UC2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RSPH3Q86UC2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RSPH3Q86UC2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RSPH3Q86UC2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
RSPH3Q86UC2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RSPH3Q86UC2 ESRRAP2-201ENST00000418437 1549 ntBASIC23.91■■□□□ 1.42
RSPH3Q86UC2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RSPH3Q86UC2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.91■■□□□ 1.42
RSPH3Q86UC2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.91■■□□□ 1.42
RSPH3Q86UC2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.91■■□□□ 1.42
RSPH3Q86UC2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.91■■□□□ 1.42
RSPH3Q86UC2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
RSPH3Q86UC2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
RSPH3Q86UC2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RSPH3Q86UC2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.9■■□□□ 1.42
RSPH3Q86UC2 HLA-L-209ENST00000420110 1011 ntBASIC23.9■■□□□ 1.42
RSPH3Q86UC2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RSPH3Q86UC2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.9■■□□□ 1.42
RSPH3Q86UC2 RAP2CP1-201ENST00000605103 478 ntBASIC23.9■■□□□ 1.42
RSPH3Q86UC2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RSPH3Q86UC2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
RSPH3Q86UC2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
RSPH3Q86UC2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.89■■□□□ 1.42
RSPH3Q86UC2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.89■■□□□ 1.42
RSPH3Q86UC2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RSPH3Q86UC2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RSPH3Q86UC2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.89■■□□□ 1.41
RSPH3Q86UC2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.89■■□□□ 1.41
RSPH3Q86UC2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.89■■□□□ 1.41
RSPH3Q86UC2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RSPH3Q86UC2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.89■■□□□ 1.41
RSPH3Q86UC2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
RSPH3Q86UC2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.89■■□□□ 1.41
RSPH3Q86UC2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RSPH3Q86UC2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
RSPH3Q86UC2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RSPH3Q86UC2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RSPH3Q86UC2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RSPH3Q86UC2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RSPH3Q86UC2 KRT87P-202ENST00000534226 1464 ntBASIC23.88■■□□□ 1.41
RSPH3Q86UC2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RSPH3Q86UC2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
RSPH3Q86UC2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RSPH3Q86UC2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.88■■□□□ 1.41
RSPH3Q86UC2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RSPH3Q86UC2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
RSPH3Q86UC2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
RSPH3Q86UC2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.87■■□□□ 1.41
RSPH3Q86UC2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RSPH3Q86UC2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
RSPH3Q86UC2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.87■■□□□ 1.41
RSPH3Q86UC2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.87■■□□□ 1.41
RSPH3Q86UC2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.87■■□□□ 1.41
RSPH3Q86UC2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RSPH3Q86UC2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.87■■□□□ 1.41
RSPH3Q86UC2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RSPH3Q86UC2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.87■■□□□ 1.41
RSPH3Q86UC2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.87■■□□□ 1.41
RSPH3Q86UC2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.86■■□□□ 1.41
RSPH3Q86UC2 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 AC011767.1-201ENST00000617410 1153 ntBASIC23.86■■□□□ 1.41
RSPH3Q86UC2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RSPH3Q86UC2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.85■■□□□ 1.41
RSPH3Q86UC2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
RSPH3Q86UC2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
RSPH3Q86UC2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.85■■□□□ 1.41
RSPH3Q86UC2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
RSPH3Q86UC2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.85■■□□□ 1.41
RSPH3Q86UC2 AC006970.2-201ENST00000450065 779 ntBASIC23.85■■□□□ 1.41
RSPH3Q86UC2 AC079089.2-201ENST00000531211 1277 ntBASIC23.85■■□□□ 1.41
RSPH3Q86UC2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms