Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 ESRRAP2-201ENST00000418437 1549 ntBASIC20.77■□□□□ 0.92
RNF44Q7L0R7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF44Q7L0R7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF44Q7L0R7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF44Q7L0R7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF44Q7L0R7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF44Q7L0R7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RNF44Q7L0R7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
RNF44Q7L0R7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF44Q7L0R7 MIR6084-201ENST00000622012 110 ntBASIC20.76■□□□□ 0.91
RNF44Q7L0R7 C1orf229-201ENST00000623686 2258 ntBASIC20.76■□□□□ 0.91
RNF44Q7L0R7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF44Q7L0R7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF44Q7L0R7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF44Q7L0R7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF44Q7L0R7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RNF44Q7L0R7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF44Q7L0R7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF44Q7L0R7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF44Q7L0R7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF44Q7L0R7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF44Q7L0R7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF44Q7L0R7 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF44Q7L0R7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RNF44Q7L0R7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF44Q7L0R7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF44Q7L0R7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF44Q7L0R7 AC137767.1-201ENST00000602918 1920 ntBASIC20.74■□□□□ 0.91
RNF44Q7L0R7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF44Q7L0R7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF44Q7L0R7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF44Q7L0R7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF44Q7L0R7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF44Q7L0R7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF44Q7L0R7 AC026271.2-201ENST00000428091 497 ntBASIC20.74■□□□□ 0.91
RNF44Q7L0R7 YBX1P1-201ENST00000445822 960 ntBASIC20.74■□□□□ 0.91
RNF44Q7L0R7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RNF44Q7L0R7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF44Q7L0R7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF44Q7L0R7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.74■□□□□ 0.91
RNF44Q7L0R7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF44Q7L0R7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF44Q7L0R7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF44Q7L0R7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF44Q7L0R7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RNF44Q7L0R7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF44Q7L0R7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.73■□□□□ 0.91
RNF44Q7L0R7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF44Q7L0R7 MIR6821-201ENST00000617625 74 ntBASIC20.73■□□□□ 0.91
RNF44Q7L0R7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF44Q7L0R7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF44Q7L0R7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF44Q7L0R7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF44Q7L0R7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RNF44Q7L0R7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF44Q7L0R7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF44Q7L0R7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF44Q7L0R7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF44Q7L0R7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF44Q7L0R7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF44Q7L0R7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.72■□□□□ 0.91
RNF44Q7L0R7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF44Q7L0R7 AC097381.1-201ENST00000429019 1296 ntBASIC20.72■□□□□ 0.91
RNF44Q7L0R7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF44Q7L0R7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF44Q7L0R7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RNF44Q7L0R7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF44Q7L0R7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF44Q7L0R7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF44Q7L0R7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF44Q7L0R7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF44Q7L0R7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF44Q7L0R7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF44Q7L0R7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF44Q7L0R7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF44Q7L0R7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF44Q7L0R7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF44Q7L0R7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF44Q7L0R7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF44Q7L0R7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RNF44Q7L0R7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF44Q7L0R7 AC123595.1-201ENST00000440769 1046 ntBASIC20.71■□□□□ 0.91
RNF44Q7L0R7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF44Q7L0R7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF44Q7L0R7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF44Q7L0R7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF44Q7L0R7 AC127496.7-201ENST00000625110 1798 ntBASIC20.71■□□□□ 0.91
RNF44Q7L0R7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF44Q7L0R7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF44Q7L0R7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF44Q7L0R7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RNF44Q7L0R7 LINC00526-201ENST00000581067 1875 ntBASIC20.71■□□□□ 0.91
RNF44Q7L0R7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF44Q7L0R7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF44Q7L0R7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF44Q7L0R7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RNF44Q7L0R7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF44Q7L0R7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF44Q7L0R7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF44Q7L0R7 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms