Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFPL4BQ6ZWI9 AC099791.2-201ENST00000605725 427 ntBASIC19.26■□□□□ 0.67
RFPL4BQ6ZWI9 AC009086.3-201ENST00000623486 1008 ntBASIC19.26■□□□□ 0.67
RFPL4BQ6ZWI9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RFPL4BQ6ZWI9 FP325331.1-202ENST00000623531 1380 ntBASIC19.26■□□□□ 0.67
RFPL4BQ6ZWI9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFPL4BQ6ZWI9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RFPL4BQ6ZWI9 LINC00526-201ENST00000581067 1875 ntBASIC19.26■□□□□ 0.67
RFPL4BQ6ZWI9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFPL4BQ6ZWI9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 AC008406.3-201ENST00000620001 1374 ntBASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 AC241377.3-202ENST00000626088 1088 ntBASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 AC241585.3-202ENST00000628937 1088 ntBASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 AC245100.8-202ENST00000629247 1058 ntBASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RFPL4BQ6ZWI9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.24■□□□□ 0.67
RFPL4BQ6ZWI9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.24■□□□□ 0.67
RFPL4BQ6ZWI9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFPL4BQ6ZWI9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFPL4BQ6ZWI9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFPL4BQ6ZWI9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RFPL4BQ6ZWI9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFPL4BQ6ZWI9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFPL4BQ6ZWI9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RFPL4BQ6ZWI9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RFPL4BQ6ZWI9 DUX4L4-201ENST00000566884 1269 ntBASIC19.24■□□□□ 0.67
RFPL4BQ6ZWI9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFPL4BQ6ZWI9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFPL4BQ6ZWI9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFPL4BQ6ZWI9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RFPL4BQ6ZWI9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFPL4BQ6ZWI9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.23■□□□□ 0.67
RFPL4BQ6ZWI9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.23■□□□□ 0.67
RFPL4BQ6ZWI9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFPL4BQ6ZWI9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.23■□□□□ 0.67
RFPL4BQ6ZWI9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RFPL4BQ6ZWI9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFPL4BQ6ZWI9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFPL4BQ6ZWI9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RFPL4BQ6ZWI9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.23■□□□□ 0.67
RFPL4BQ6ZWI9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.22■□□□□ 0.67
RFPL4BQ6ZWI9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL4BQ6ZWI9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL4BQ6ZWI9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL4BQ6ZWI9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL4BQ6ZWI9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RFPL4BQ6ZWI9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL4BQ6ZWI9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL4BQ6ZWI9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL4BQ6ZWI9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.21■□□□□ 0.67
RFPL4BQ6ZWI9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL4BQ6ZWI9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL4BQ6ZWI9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL4BQ6ZWI9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.21■□□□□ 0.67
RFPL4BQ6ZWI9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFPL4BQ6ZWI9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.2■□□□□ 0.66
RFPL4BQ6ZWI9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL4BQ6ZWI9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
RFPL4BQ6ZWI9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.2■□□□□ 0.66
RFPL4BQ6ZWI9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL4BQ6ZWI9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.2■□□□□ 0.66
RFPL4BQ6ZWI9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL4BQ6ZWI9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL4BQ6ZWI9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFPL4BQ6ZWI9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms