Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 AC008406.3-201ENST00000620001 1374 ntBASIC21.88■■□□□ 1.09
PACS1Q6VY07 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PACS1Q6VY07 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
PACS1Q6VY07 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PACS1Q6VY07 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PACS1Q6VY07 CA15P2-201ENST00000611168 834 ntBASIC21.88■■□□□ 1.09
PACS1Q6VY07 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.88■■□□□ 1.09
PACS1Q6VY07 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
PACS1Q6VY07 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
PACS1Q6VY07 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PACS1Q6VY07 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PACS1Q6VY07 AL137060.1-201ENST00000618151 2648 ntBASIC21.88■■□□□ 1.09
PACS1Q6VY07 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PACS1Q6VY07 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PACS1Q6VY07 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PACS1Q6VY07 AC133637.1-201ENST00000624115 1537 ntBASIC21.87■■□□□ 1.09
PACS1Q6VY07 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PACS1Q6VY07 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.87■■□□□ 1.09
PACS1Q6VY07 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PACS1Q6VY07 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PACS1Q6VY07 AC010542.4-201ENST00000563151 1910 ntBASIC21.87■■□□□ 1.09
PACS1Q6VY07 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PACS1Q6VY07 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PACS1Q6VY07 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PACS1Q6VY07 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.87■■□□□ 1.09
PACS1Q6VY07 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PACS1Q6VY07 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
PACS1Q6VY07 SYT6-210ENST00000641643 1587 ntBASIC21.87■■□□□ 1.09
PACS1Q6VY07 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PACS1Q6VY07 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PACS1Q6VY07 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.86■■□□□ 1.09
PACS1Q6VY07 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PACS1Q6VY07 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.86■■□□□ 1.09
PACS1Q6VY07 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PACS1Q6VY07 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.86■■□□□ 1.09
PACS1Q6VY07 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PACS1Q6VY07 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PACS1Q6VY07 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.86■■□□□ 1.09
PACS1Q6VY07 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PACS1Q6VY07 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PACS1Q6VY07 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PACS1Q6VY07 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PACS1Q6VY07 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PACS1Q6VY07 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PACS1Q6VY07 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PACS1Q6VY07 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.85■■□□□ 1.09
PACS1Q6VY07 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PACS1Q6VY07 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.85■■□□□ 1.09
PACS1Q6VY07 SERBP1P1-201ENST00000396021 1160 ntBASIC21.85■■□□□ 1.09
PACS1Q6VY07 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.85■■□□□ 1.09
PACS1Q6VY07 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.85■■□□□ 1.09
PACS1Q6VY07 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.85■■□□□ 1.09
PACS1Q6VY07 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.85■■□□□ 1.09
PACS1Q6VY07 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
PACS1Q6VY07 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
PACS1Q6VY07 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
PACS1Q6VY07 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.85■■□□□ 1.09
PACS1Q6VY07 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.85■■□□□ 1.09
PACS1Q6VY07 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.85■■□□□ 1.09
PACS1Q6VY07 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PACS1Q6VY07 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PACS1Q6VY07 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PACS1Q6VY07 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PACS1Q6VY07 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PACS1Q6VY07 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
PACS1Q6VY07 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PACS1Q6VY07 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PACS1Q6VY07 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PACS1Q6VY07 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PACS1Q6VY07 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
PACS1Q6VY07 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PACS1Q6VY07 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PACS1Q6VY07 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
PACS1Q6VY07 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.83■■□□□ 1.09
PACS1Q6VY07 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PACS1Q6VY07 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.83■■□□□ 1.09
PACS1Q6VY07 AC011298.3-201ENST00000615796 283 ntBASIC21.83■■□□□ 1.09
PACS1Q6VY07 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.83■■□□□ 1.09
PACS1Q6VY07 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
PACS1Q6VY07 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.08
PACS1Q6VY07 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.83■■□□□ 1.08
PACS1Q6VY07 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.83■■□□□ 1.08
PACS1Q6VY07 FAM99A-202ENST00000538190 1989 ntBASIC21.83■■□□□ 1.08
PACS1Q6VY07 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
PACS1Q6VY07 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.82■■□□□ 1.08
PACS1Q6VY07 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.82■■□□□ 1.08
PACS1Q6VY07 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PACS1Q6VY07 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
PACS1Q6VY07 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PACS1Q6VY07 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.82■■□□□ 1.08
PACS1Q6VY07 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.82■■□□□ 1.08
PACS1Q6VY07 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.81■■□□□ 1.08
PACS1Q6VY07 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PACS1Q6VY07 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PACS1Q6VY07 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.81■■□□□ 1.08
PACS1Q6VY07 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PACS1Q6VY07 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PACS1Q6VY07 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PACS1Q6VY07 AC136469.2-201ENST00000623944 1028 ntBASIC21.81■■□□□ 1.08
PACS1Q6VY07 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms