Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
SHC4Q6S5L8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
SHC4Q6S5L8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
SHC4Q6S5L8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SHC4Q6S5L8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SHC4Q6S5L8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SHC4Q6S5L8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SHC4Q6S5L8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.54■■□□□ 1.52
SHC4Q6S5L8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.54■■□□□ 1.52
SHC4Q6S5L8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SHC4Q6S5L8 AC026310.3-201ENST00000625186 2373 ntBASIC24.54■■□□□ 1.52
SHC4Q6S5L8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC24.54■■□□□ 1.52
SHC4Q6S5L8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SHC4Q6S5L8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
SHC4Q6S5L8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.54■■□□□ 1.52
SHC4Q6S5L8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SHC4Q6S5L8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.54■■□□□ 1.52
SHC4Q6S5L8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.54■■□□□ 1.52
SHC4Q6S5L8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.54■■□□□ 1.52
SHC4Q6S5L8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SHC4Q6S5L8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
SHC4Q6S5L8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SHC4Q6S5L8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SHC4Q6S5L8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SHC4Q6S5L8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SHC4Q6S5L8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.53■■□□□ 1.52
SHC4Q6S5L8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.53■■□□□ 1.52
SHC4Q6S5L8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SHC4Q6S5L8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC24.52■■□□□ 1.52
SHC4Q6S5L8 SERBP1P1-201ENST00000396021 1160 ntBASIC24.52■■□□□ 1.52
SHC4Q6S5L8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.52■■□□□ 1.52
SHC4Q6S5L8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SHC4Q6S5L8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SHC4Q6S5L8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SHC4Q6S5L8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SHC4Q6S5L8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SHC4Q6S5L8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.51■■□□□ 1.51
SHC4Q6S5L8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
SHC4Q6S5L8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.51■■□□□ 1.51
SHC4Q6S5L8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SHC4Q6S5L8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SHC4Q6S5L8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.51■■□□□ 1.51
SHC4Q6S5L8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.51■■□□□ 1.51
SHC4Q6S5L8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SHC4Q6S5L8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
SHC4Q6S5L8 PTCHD3P2-201ENST00000424937 1205 ntBASIC24.51■■□□□ 1.51
SHC4Q6S5L8 AC131281.2-201ENST00000520478 145 ntBASIC24.51■■□□□ 1.51
SHC4Q6S5L8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.51■■□□□ 1.51
SHC4Q6S5L8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SHC4Q6S5L8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SHC4Q6S5L8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
SHC4Q6S5L8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
SHC4Q6S5L8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC24.51■■□□□ 1.51
SHC4Q6S5L8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SHC4Q6S5L8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.5■■□□□ 1.51
SHC4Q6S5L8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
SHC4Q6S5L8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SHC4Q6S5L8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
SHC4Q6S5L8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SHC4Q6S5L8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SHC4Q6S5L8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.5■■□□□ 1.51
SHC4Q6S5L8 AC092171.4-201ENST00000609130 632 ntBASIC24.5■■□□□ 1.51
SHC4Q6S5L8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.5■■□□□ 1.51
SHC4Q6S5L8 AC026471.6-201ENST00000622954 1905 ntBASIC24.5■■□□□ 1.51
SHC4Q6S5L8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.5■■□□□ 1.51
SHC4Q6S5L8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SHC4Q6S5L8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC24.49■■□□□ 1.51
SHC4Q6S5L8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SHC4Q6S5L8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC24.49■■□□□ 1.51
SHC4Q6S5L8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SHC4Q6S5L8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SHC4Q6S5L8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SHC4Q6S5L8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.49■■□□□ 1.51
SHC4Q6S5L8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.49■■□□□ 1.51
SHC4Q6S5L8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SHC4Q6S5L8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SHC4Q6S5L8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC24.49■■□□□ 1.51
SHC4Q6S5L8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SHC4Q6S5L8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SHC4Q6S5L8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SHC4Q6S5L8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SHC4Q6S5L8 GOLGA2P6-201ENST00000340929 2049 ntBASIC24.48■■□□□ 1.51
SHC4Q6S5L8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
SHC4Q6S5L8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SHC4Q6S5L8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.48■■□□□ 1.51
SHC4Q6S5L8 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.48■■□□□ 1.51
SHC4Q6S5L8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.48■■□□□ 1.51
SHC4Q6S5L8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
SHC4Q6S5L8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SHC4Q6S5L8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.48■■□□□ 1.51
SHC4Q6S5L8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.48■■□□□ 1.51
SHC4Q6S5L8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
SHC4Q6S5L8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
SHC4Q6S5L8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
SHC4Q6S5L8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SHC4Q6S5L8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
SHC4Q6S5L8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24.47■■□□□ 1.51
SHC4Q6S5L8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
SHC4Q6S5L8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
SHC4Q6S5L8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms