Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 MNT4YNR059W 1743 nt3.75□□□□□ -1.81
RUP1Q12242 ASI1YMR119W 1875 nt3.75□□□□□ -1.81
RUP1Q12242 ROK1YGL171W 1695 nt3.75□□□□□ -1.81
RUP1Q12242 YOL075CYOL075C 3885 nt3.74□□□□□ -1.81
RUP1Q12242 BUD5YCR038C 1929 nt3.74□□□□□ -1.81
RUP1Q12242 YCL076WYCL076W 744 nt3.74□□□□□ -1.81
RUP1Q12242 MRPL11YDL202W 750 nt3.74□□□□□ -1.81
RUP1Q12242 YGL088WYGL088W 366 nt3.74□□□□□ -1.81
RUP1Q12242 AIM21YIR003W 2040 nt3.74□□□□□ -1.81
RUP1Q12242 AUR1YKL004W 1206 nt3.74□□□□□ -1.81
RUP1Q12242 ELF1YKL160W 438 nt3.74□□□□□ -1.81
RUP1Q12242 GMH1YKR030W 822 nt3.74□□□□□ -1.81
RUP1Q12242 MRPL20YKR085C 588 nt3.74□□□□□ -1.81
RUP1Q12242 DSC2YOL073C 969 nt3.74□□□□□ -1.81
RUP1Q12242 YVC1YOR087W 2028 nt3.74□□□□□ -1.81
RUP1Q12242 FDH1YOR388C 1131 nt3.74□□□□□ -1.81
RUP1Q12242 MCM16YPR046W 546 nt3.74□□□□□ -1.81
RUP1Q12242 KIN4YOR233W 2403 nt3.74□□□□□ -1.81
RUP1Q12242 RIM4YHL024W 2142 nt3.74□□□□□ -1.81
RUP1Q12242 RSC3YDR303C 2658 nt3.74□□□□□ -1.81
RUP1Q12242 KTR6YPL053C 1341 nt3.73□□□□□ -1.81
RUP1Q12242 SIP1YDR422C 2448 nt3.73□□□□□ -1.81
RUP1Q12242 RTS1YOR014W 2274 nt3.73□□□□□ -1.81
RUP1Q12242 PMS1YNL082W 2622 nt3.73□□□□□ -1.81
RUP1Q12242 YGL188CYGL188C 174 nt3.73□□□□□ -1.81
RUP1Q12242 MTD1YKR080W 963 nt3.73□□□□□ -1.81
RUP1Q12242 YPT7YML001W 627 nt3.73□□□□□ -1.81
RUP1Q12242 RPS10BYMR230W 318 nt3.73□□□□□ -1.81
RUP1Q12242 YBL096CYBL096C 309 nt3.73□□□□□ -1.81
RUP1Q12242 RFM1YOR279C 933 nt3.73□□□□□ -1.81
RUP1Q12242 SNF8YPL002C 702 nt3.73□□□□□ -1.81
RUP1Q12242 RIT1YMR283C 1542 nt3.73□□□□□ -1.81
RUP1Q12242 AGA1YNR044W 2178 nt3.73□□□□□ -1.81
RUP1Q12242 DAN4YJR151C 3486 nt3.73□□□□□ -1.81
RUP1Q12242 PRS5YOL061W 1491 nt3.73□□□□□ -1.81
RUP1Q12242 GCD1YOR260W 1737 nt3.73□□□□□ -1.81
RUP1Q12242 TAF8YML114C 1533 nt3.72□□□□□ -1.81
RUP1Q12242 RRG1YDR065W 1098 nt3.72□□□□□ -1.81
RUP1Q12242 ERV29YGR284C 933 nt3.72□□□□□ -1.81
RUP1Q12242 BAT2YJR148W 1131 nt3.72□□□□□ -1.81
RUP1Q12242 YML053CYML053C 639 nt3.72□□□□□ -1.81
RUP1Q12242 YBR225WYBR225W 2703 nt3.72□□□□□ -1.81
RUP1Q12242 NTA1YJR062C 1374 nt3.72□□□□□ -1.81
RUP1Q12242 UBP12YJL197W 3765 nt3.72□□□□□ -1.81
RUP1Q12242 RPC11YDR045C 333 nt3.71□□□□□ -1.82
RUP1Q12242 RNH202YDR279W 1053 nt3.71□□□□□ -1.82
RUP1Q12242 CAP2YIL034C 864 nt3.71□□□□□ -1.82
RUP1Q12242 YKL162C-AYKL162C-A 153 nt3.71□□□□□ -1.82
RUP1Q12242 YLR156WYLR156W 345 nt3.71□□□□□ -1.82
RUP1Q12242 YLR159WYLR159W 345 nt3.71□□□□□ -1.82
RUP1Q12242 YLR161WYLR161W 345 nt3.71□□□□□ -1.82
RUP1Q12242 MRPS17YMR188C 714 nt3.71□□□□□ -1.82
RUP1Q12242 YOR186WYOR186W 435 nt3.71□□□□□ -1.82
RUP1Q12242 HSH49YOR319W 642 nt3.71□□□□□ -1.82
RUP1Q12242 RPS11BYBR048W 471 nt3.71□□□□□ -1.82
RUP1Q12242 SPP381YBR152W 876 nt3.71□□□□□ -1.82
RUP1Q12242 RNA14YMR061W 2034 nt3.71□□□□□ -1.82
RUP1Q12242 FAR8YMR029C 1572 nt3.71□□□□□ -1.82
RUP1Q12242 HAP4YKL109W 1665 nt3.71□□□□□ -1.82
RUP1Q12242 KRI1YNL308C 1776 nt3.71□□□□□ -1.82
RUP1Q12242 PST1YDR055W 1335 nt3.7□□□□□ -1.82
RUP1Q12242 YFL040WYFL040W 1623 nt3.7□□□□□ -1.82
RUP1Q12242 URA2YJL130C 6645 nt3.7□□□□□ -1.82
RUP1Q12242 YGR051CYGR051C 324 nt3.7□□□□□ -1.82
RUP1Q12242 CDC12YHR107C 1224 nt3.7□□□□□ -1.82
RUP1Q12242 USB1YLR132C 873 nt3.7□□□□□ -1.82
RUP1Q12242 SEC65YML105C 822 nt3.7□□□□□ -1.82
RUP1Q12242 MED11YMR112C 396 nt3.7□□□□□ -1.82
RUP1Q12242 EAF7YNL136W 1278 nt3.7□□□□□ -1.82
RUP1Q12242 RET3YPL010W 570 nt3.7□□□□□ -1.82
RUP1Q12242 RPL19AYBR084C-A 570 nt3.7□□□□□ -1.82
RUP1Q12242 FRM2YCL026C-A 582 nt3.7□□□□□ -1.82
RUP1Q12242 PDR12YPL058C 4536 nt3.7□□□□□ -1.82
RUP1Q12242 KIP3YGL216W 2418 nt3.7□□□□□ -1.82
RUP1Q12242 ERG5YMR015C 1617 nt3.7□□□□□ -1.82
RUP1Q12242 CIT1YNR001C 1440 nt3.7□□□□□ -1.82
RUP1Q12242 ARO80YDR421W 2853 nt3.69□□□□□ -1.82
RUP1Q12242 VPS27YNR006W 1869 nt3.69□□□□□ -1.82
RUP1Q12242 ATG21YPL100W 1491 nt3.69□□□□□ -1.82
RUP1Q12242 YLR352WYLR352W 2424 nt3.69□□□□□ -1.82
RUP1Q12242 YDL186WYDL186W 834 nt3.69□□□□□ -1.82
RUP1Q12242 FCF1YDR339C 570 nt3.69□□□□□ -1.82
RUP1Q12242 FUR1YHR128W 651 nt3.69□□□□□ -1.82
RUP1Q12242 HOT13YKL084W 351 nt3.69□□□□□ -1.82
RUP1Q12242 CTL1YMR180C 963 nt3.69□□□□□ -1.82
RUP1Q12242 PFK27YOL136C 1194 nt3.69□□□□□ -1.82
RUP1Q12242 ECM8YBR076W 1065 nt3.69□□□□□ -1.82
RUP1Q12242 DSN1YIR010W 1731 nt3.69□□□□□ -1.82
RUP1Q12242 USA1YML029W 2517 nt3.69□□□□□ -1.82
RUP1Q12242 GSC2YGR032W 5688 nt3.68□□□□□ -1.82
RUP1Q12242 HAT2YEL056W 1206 nt3.68□□□□□ -1.82
RUP1Q12242 IGO2YHR132W-A 396 nt3.68□□□□□ -1.82
RUP1Q12242 YLR042CYLR042C 486 nt3.68□□□□□ -1.82
RUP1Q12242 ATG16YMR159C 453 nt3.68□□□□□ -1.82
RUP1Q12242 OSW1YOR255W 837 nt3.68□□□□□ -1.82
RUP1Q12242 BUD27YFL023W 2391 nt3.68□□□□□ -1.82
RUP1Q12242 SWI1YPL016W 3945 nt3.68□□□□□ -1.82
RUP1Q12242 MNR2YKL064W 2910 nt3.67□□□□□ -1.82
RUP1Q12242 MTR2YKL186C 555 nt3.67□□□□□ -1.82
RUP1Q12242 PAM18YLR008C 507 nt3.67□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 22.8 ms