Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC3A1Q07837 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SLC3A1Q07837 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC3A1Q07837 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SLC3A1Q07837 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC3A1Q07837 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC3A1Q07837 AC010542.4-201ENST00000563151 1910 ntBASIC19.41■□□□□ 0.7
SLC3A1Q07837 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC3A1Q07837 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC3A1Q07837 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC3A1Q07837 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC3A1Q07837 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC3A1Q07837 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SLC3A1Q07837 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC3A1Q07837 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC3A1Q07837 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC3A1Q07837 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC3A1Q07837 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC3A1Q07837 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC3A1Q07837 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLC3A1Q07837 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.39■□□□□ 0.7
SLC3A1Q07837 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC3A1Q07837 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC3A1Q07837 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC3A1Q07837 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC3A1Q07837 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC3A1Q07837 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC3A1Q07837 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.39■□□□□ 0.69
SLC3A1Q07837 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC3A1Q07837 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC3A1Q07837 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC3A1Q07837 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC3A1Q07837 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC3A1Q07837 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC3A1Q07837 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC3A1Q07837 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SLC3A1Q07837 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC3A1Q07837 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC3A1Q07837 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC3A1Q07837 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SLC3A1Q07837 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC3A1Q07837 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC3A1Q07837 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC3A1Q07837 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC3A1Q07837 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC3A1Q07837 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC3A1Q07837 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SLC3A1Q07837 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SLC3A1Q07837 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.38■□□□□ 0.69
SLC3A1Q07837 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC3A1Q07837 AC008406.3-201ENST00000620001 1374 ntBASIC19.38■□□□□ 0.69
SLC3A1Q07837 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SLC3A1Q07837 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SLC3A1Q07837 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SLC3A1Q07837 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC3A1Q07837 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SLC3A1Q07837 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.37■□□□□ 0.69
SLC3A1Q07837 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC3A1Q07837 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC3A1Q07837 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC3A1Q07837 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC3A1Q07837 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC3A1Q07837 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC3A1Q07837 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC3A1Q07837 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC3A1Q07837 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC3A1Q07837 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC3A1Q07837 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC3A1Q07837 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC3A1Q07837 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC3A1Q07837 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC3A1Q07837 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC3A1Q07837 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC3A1Q07837 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC3A1Q07837 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SLC3A1Q07837 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC3A1Q07837 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC3A1Q07837 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC3A1Q07837 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC3A1Q07837 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC3A1Q07837 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.36■□□□□ 0.69
SLC3A1Q07837 AL117332.1-201ENST00000622628 974 ntBASIC19.36■□□□□ 0.69
SLC3A1Q07837 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC3A1Q07837 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC3A1Q07837 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC3A1Q07837 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC3A1Q07837 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC3A1Q07837 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SLC3A1Q07837 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC3A1Q07837 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC3A1Q07837 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.35■□□□□ 0.69
SLC3A1Q07837 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.35■□□□□ 0.69
SLC3A1Q07837 MIR3621-201ENST00000580529 85 ntBASIC19.35■□□□□ 0.69
SLC3A1Q07837 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC3A1Q07837 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC3A1Q07837 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC3A1Q07837 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC3A1Q07837 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC3A1Q07837 LINC01960-201ENST00000563759 1884 ntBASIC19.35■□□□□ 0.69
SLC3A1Q07837 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms