Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
CCL20P78556 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.08■□□□□ 0.32
CCL20P78556 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL20P78556 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.07■□□□□ 0.32
CCL20P78556 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL20P78556 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL20P78556 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL20P78556 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL20P78556 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.07■□□□□ 0.32
CCL20P78556 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL20P78556 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL20P78556 AC007029.1-201ENST00000604183 313 ntBASIC17.07■□□□□ 0.32
CCL20P78556 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCL20P78556 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCL20P78556 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCL20P78556 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.07■□□□□ 0.32
CCL20P78556 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.07■□□□□ 0.32
CCL20P78556 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
CCL20P78556 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CCL20P78556 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCL20P78556 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL20P78556 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL20P78556 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL20P78556 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL20P78556 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCL20P78556 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCL20P78556 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.06■□□□□ 0.32
CCL20P78556 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL20P78556 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.06■□□□□ 0.32
CCL20P78556 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL20P78556 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.06■□□□□ 0.32
CCL20P78556 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCL20P78556 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL20P78556 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CCL20P78556 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCL20P78556 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCL20P78556 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCL20P78556 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL20P78556 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCL20P78556 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL20P78556 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL20P78556 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCL20P78556 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL20P78556 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL20P78556 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCL20P78556 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCL20P78556 RPS2P7-201ENST00000447334 885 ntBASIC17.05■□□□□ 0.32
CCL20P78556 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CCL20P78556 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.05■□□□□ 0.32
CCL20P78556 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.05■□□□□ 0.32
CCL20P78556 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL20P78556 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCL20P78556 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL20P78556 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL20P78556 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.05■□□□□ 0.32
CCL20P78556 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCL20P78556 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCL20P78556 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCL20P78556 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL20P78556 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CCL20P78556 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CCL20P78556 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL20P78556 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL20P78556 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.04■□□□□ 0.32
CCL20P78556 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCL20P78556 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL20P78556 LINC01960-201ENST00000563759 1884 ntBASIC17.04■□□□□ 0.32
CCL20P78556 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL20P78556 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL20P78556 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCL20P78556 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CCL20P78556 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCL20P78556 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCL20P78556 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.04■□□□□ 0.32
CCL20P78556 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCL20P78556 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCL20P78556 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.04■□□□□ 0.32
CCL20P78556 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.04■□□□□ 0.32
CCL20P78556 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL20P78556 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CCL20P78556 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL20P78556 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL20P78556 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.03■□□□□ 0.32
CCL20P78556 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.03■□□□□ 0.32
CCL20P78556 AFG3L1P-217ENST00000557444 2447 ntBASIC17.03■□□□□ 0.32
CCL20P78556 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCL20P78556 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCL20P78556 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.03■□□□□ 0.32
CCL20P78556 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CCL20P78556 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.03■□□□□ 0.32
CCL20P78556 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.03■□□□□ 0.32
CCL20P78556 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCL20P78556 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.03■□□□□ 0.32
CCL20P78556 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCL20P78556 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL20P78556 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCL20P78556 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCL20P78556 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCL20P78556 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.02■□□□□ 0.32
CCL20P78556 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms