Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBE2NP61088 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.02■□□□□ 0.63
UBE2NP61088 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.01■□□□□ 0.63
UBE2NP61088 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2NP61088 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2NP61088 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
UBE2NP61088 C9orf163-202ENST00000624034 2573 ntBASIC19.01■□□□□ 0.63
UBE2NP61088 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.01■□□□□ 0.63
UBE2NP61088 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2NP61088 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2NP61088 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2NP61088 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2NP61088 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2NP61088 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2NP61088 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2NP61088 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2NP61088 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.01■□□□□ 0.63
UBE2NP61088 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2NP61088 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2NP61088 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBE2NP61088 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
UBE2NP61088 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19■□□□□ 0.63
UBE2NP61088 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBE2NP61088 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
UBE2NP61088 AK1-201ENST00000223836 736 ntTSL 3 BASIC19■□□□□ 0.63
UBE2NP61088 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19■□□□□ 0.63
UBE2NP61088 AC012414.1-201ENST00000556676 535 ntBASIC19■□□□□ 0.63
UBE2NP61088 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBE2NP61088 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
UBE2NP61088 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19■□□□□ 0.63
UBE2NP61088 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19■□□□□ 0.63
UBE2NP61088 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19■□□□□ 0.63
UBE2NP61088 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
UBE2NP61088 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBE2NP61088 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
UBE2NP61088 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBE2NP61088 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
UBE2NP61088 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
UBE2NP61088 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
UBE2NP61088 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2NP61088 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2NP61088 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
UBE2NP61088 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.99■□□□□ 0.63
UBE2NP61088 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.99■□□□□ 0.63
UBE2NP61088 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2NP61088 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
UBE2NP61088 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.99■□□□□ 0.63
UBE2NP61088 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.99■□□□□ 0.63
UBE2NP61088 MIR935-201ENST00000401179 91 ntBASIC18.99■□□□□ 0.63
UBE2NP61088 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.99■□□□□ 0.63
UBE2NP61088 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.99■□□□□ 0.63
UBE2NP61088 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2NP61088 AC079089.2-201ENST00000531211 1277 ntBASIC18.99■□□□□ 0.63
UBE2NP61088 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.99■□□□□ 0.63
UBE2NP61088 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
UBE2NP61088 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2NP61088 ESRRAP2-201ENST00000418437 1549 ntBASIC18.99■□□□□ 0.63
UBE2NP61088 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
UBE2NP61088 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
UBE2NP61088 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2NP61088 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2NP61088 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBE2NP61088 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.99■□□□□ 0.63
UBE2NP61088 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2NP61088 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2NP61088 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.98■□□□□ 0.63
UBE2NP61088 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2NP61088 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.98■□□□□ 0.63
UBE2NP61088 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBE2NP61088 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.98■□□□□ 0.63
UBE2NP61088 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2NP61088 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2NP61088 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2NP61088 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.97■□□□□ 0.63
UBE2NP61088 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.97■□□□□ 0.63
UBE2NP61088 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.97■□□□□ 0.63
UBE2NP61088 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2NP61088 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2NP61088 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
UBE2NP61088 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2NP61088 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBE2NP61088 C1orf229-201ENST00000623686 2258 ntBASIC18.97■□□□□ 0.63
UBE2NP61088 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
UBE2NP61088 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2NP61088 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2NP61088 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2NP61088 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.96■□□□□ 0.63
UBE2NP61088 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
UBE2NP61088 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2NP61088 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.96■□□□□ 0.63
UBE2NP61088 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.96■□□□□ 0.63
UBE2NP61088 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2NP61088 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.96■□□□□ 0.63
UBE2NP61088 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2NP61088 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2NP61088 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2NP61088 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
UBE2NP61088 AC087742.1-201ENST00000575880 1738 ntBASIC18.96■□□□□ 0.63
UBE2NP61088 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBE2NP61088 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms